| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_2311 |
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| Symbol | |
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| ID | 6981050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | - |
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| Start bp | 2366157 |
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| End bp | 2368940 |
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| Gene Length | 2784 bp |
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| Protein Length | 927 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643397024 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002281812 |
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| Protein GI | 209549895 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.861502 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTACCG TTCTGACGTG CGTTACCGAG CAGCATGATC TCACGCTGGT CGGGCTTGCG
GGTCTGATCT GCTTTCTCGC CAGCCATTGC GCGCTCGTTC TGCTGCATCG GGCGACGTTG
TCCGATGGCG CGGTGCGGTG GGTGTGGCTG GTGACGGCGG GGGCGGCGGG CGGTTTCGGC
ATCTGGGCCA CGCATTTCAT CGCCATGCTG GCCTACGATC CCGGTGTCGT CGTCGGCTAC
CACGCCGGAT TGACGCTGGT CTCGCTGCTG GTGGCGATCG TGGCGACAAC GGCGGCGGTT
GCCGCCAAGA TCGCCTTTGA TAGATGGGTG GCGAACGTCC TGGCGGGCGT GCTCTTCGGC
GTCGGTATCT GGTCTATGCA TTTCGCCGGC ATGTTGGCGA TCGAATTCCC CGGTGAAATC
TCGTGGGATA CGGGCTTCGT GACGGCCTCG GTCGTTCTCG GCGTGGCGTT TTCGGTCGCT
GCCTTTCGAT TTGCCGGCCG GAGCGGCCGG TCGACTTTGG GTAAGCTGGC GCCGACGGTT
CTCCTGACGC TTGGCGTCGT CGCCCTGCAT TTCACCGCAA TGGCCGGGAT AACGGTCATT
CCCGGGATCA CGGCGCTCAA TCCCGCCATG CTTCTTTCGC CGGCGCTGAT GGCGGTGACG
ATCGCCGCCG TCACCTTTTC GCTGCTGGCG GCGGGTTTTG CGGCCGCCAT CTTCGCCGTG
CGCTCACAGG CCAAGACGGC CGGGGCCGAG CGCAACTTCA AGCTCCTGGT GCAGGGGGTG
ACCGATTACG CGATCTATAT GCTCGATCCG GATGGCAAGG TCAGCAACTG GAATGCCGGC
GCCGAGCGTG CCAAGGGCTA TAGCGCCGAT GAGATCGTCG GCAAGGATTT CTCGCTGTTC
TATTCTGAGG AGGATCGCCG CAAGGGCCTG CCGCAGCGGG CGCTTCAGAC CGCCCGCAGC
GAAGGCAAGT TCGAGGCGCA GGGATGGCGA TACCGCAAGG ACGGCTCCTC CTTCTGGGCC
CATGTCGTCA TCGACCCGAT CTATGACAAG GCCGGCGAAC TGATCGGCTA TGCCAAGATC
ACCAAGGACA ACAGCAAGCA GAAGGCGGAT GCCGACCGGA TCGAGGAAAT CACCCGCAAT
CTCGATGTCG CGCTCGAAAA TATCGGGCAG GGCATCTGCA TGTTCGACAG GGACGAGCGG
CTGTTGCTTT GCAACAAACG CTATCTGGAA ATTTTTCGGT TCCCCGAGGG ATCGGTGCGT
CCCGGCATGG TCTACCGTGA GATCGTCGAC ATCGGTTATG CCGCCAATAC CGAGGACCCC
GGCGAGGCGG CCGCGCGGGC CGAGGCGCAT TATACCAGAA ACATGGCGCT GATCAGATCA
GGTGCGGGCA GCGCGGTTCA CAAATATCCG AGCGGCATAT CCATCCAGCA GAATGTCAAC
ATGCTGCCCA ATGGCGGCTG GGTCGTCACC TTCGAAGACA TCACCGATCG GCTGAAATCC
GAGGAGCAGG TTGCCTTCCT TGCCAAGCAT GACGGCCTGA CGGGCCTGCC GAACCGGCTG
CAGTTCGGCG AGAGCGTCTC GGAGGAAATG ATGATCGCCG ACCGGGTGAG GGGCAACGTC
GCCGTCATCG GCATCGACCT CGACAAGTTC AAGGAGATCA ACGACCAGCA CGGGCACGGC
ACCGGCGACA AGGTGCTTGT CGAGCTGGCG CGGCGTCTCG ACGAAGCGCG GCAGGAGGGT
GAGTTCATCG CTCGGTTCGG CGGAGACGAG TTCGCCGCGA CCAAGCGCTT CGATGAGCTG
AGCGCGCTGC ACGATTTCAT CGCGCGGCTG GAAGGCGCGC TGACCGGGAC GGTCACGATC
GACGGCTTCG AGATCAAGAC CGGCGCCAGC CTCGGCGTGG CGGTTTATCC GAGCGACGCG
GCAGGCGTCG ACGGCCTTCT CGCCAATGCC GACCTTGCCA TGTACCGCGC CAAACAATCC
TTGCTGCAGA AGGTCTGCTT CTACGAGGCT GCGATGGACG AGCATGCGCG CCGCCGCCGC
TCGCTCGCCA AGGACCTCTG GGCCTCGATC GACCGCAGCC AGCTGCATCT GCACTATCAG
GTGCAGAAAT CGGTGCGGAC GGGCGAGATC ACCGGTTATG AAGTTCTGCT GCGTTGGCGG
CATCATGAAC GCGGCAATAT CCCGCCGATG GATTTCATCG GCCTTGCCGA GGAATGCGGC
GCGATCCTGC CGATCGGCGA ATGGGTGCTC AGGGAAGCCT GCCGCGAGGC GGCGAGCTGG
AACAACAGCC ACAAGATCGC CGTCAACCTG TCCCCGATCC AGCTCGGCCA TGCCGATATG
GCGGTCGTCA TATCAGAGAT CCTTCTGGAA ACCGGTCTGA ACCCGCGGCG CCTCGAAATC
GAGATCACCG AAAGCTCGAT CATCGTCGAC AAGGACAAGG CCTTGCGGAC AATGCGGCAG
ATCAAGGCGC TCGGCGTCTC GATCGCCATC GACGACTTCG GCACCGGCTA TTCCTCACTG
GAAACGCTGC GCTCCTTCCC GTTCGACAAG ATCAAGCTCG ACAAGAGCTT CATGGCCGAG
GTCGAAACCA GCCCGCAGTC AAAAGCAATC GTCCGCGCCA TCCTGGCGCT TGGCCGCAGC
CTCGAAGTGC CGGTGCTCGC CGAAGGCGTG GAAACTCAGG CGCAGCTCGA CACGCTCTTG
GAAGAGCAGT GCGACGAGGC GCAGGGCTAC CTGCTCGGCA AGCCGCAGGC GATGGGCGAG
CCGGTGGTTG AGAAGGCGGC TTGA
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| Protein sequence | MFTVLTCVTE QHDLTLVGLA GLICFLASHC ALVLLHRATL SDGAVRWVWL VTAGAAGGFG
IWATHFIAML AYDPGVVVGY HAGLTLVSLL VAIVATTAAV AAKIAFDRWV ANVLAGVLFG
VGIWSMHFAG MLAIEFPGEI SWDTGFVTAS VVLGVAFSVA AFRFAGRSGR STLGKLAPTV
LLTLGVVALH FTAMAGITVI PGITALNPAM LLSPALMAVT IAAVTFSLLA AGFAAAIFAV
RSQAKTAGAE RNFKLLVQGV TDYAIYMLDP DGKVSNWNAG AERAKGYSAD EIVGKDFSLF
YSEEDRRKGL PQRALQTARS EGKFEAQGWR YRKDGSSFWA HVVIDPIYDK AGELIGYAKI
TKDNSKQKAD ADRIEEITRN LDVALENIGQ GICMFDRDER LLLCNKRYLE IFRFPEGSVR
PGMVYREIVD IGYAANTEDP GEAAARAEAH YTRNMALIRS GAGSAVHKYP SGISIQQNVN
MLPNGGWVVT FEDITDRLKS EEQVAFLAKH DGLTGLPNRL QFGESVSEEM MIADRVRGNV
AVIGIDLDKF KEINDQHGHG TGDKVLVELA RRLDEARQEG EFIARFGGDE FAATKRFDEL
SALHDFIARL EGALTGTVTI DGFEIKTGAS LGVAVYPSDA AGVDGLLANA DLAMYRAKQS
LLQKVCFYEA AMDEHARRRR SLAKDLWASI DRSQLHLHYQ VQKSVRTGEI TGYEVLLRWR
HHERGNIPPM DFIGLAEECG AILPIGEWVL REACREAASW NNSHKIAVNL SPIQLGHADM
AVVISEILLE TGLNPRRLEI EITESSIIVD KDKALRTMRQ IKALGVSIAI DDFGTGYSSL
ETLRSFPFDK IKLDKSFMAE VETSPQSKAI VRAILALGRS LEVPVLAEGV ETQAQLDTLL
EEQCDEAQGY LLGKPQAMGE PVVEKAA
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