| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_2134 |
|---|
| Symbol | |
|---|
| ID | 6980873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 2194198 |
|---|
| End bp | 2195988 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643396856 |
|---|
| Product | Chloride channel core |
|---|
| Protein accession | YP_002281644 |
|---|
| Protein GI | 209549727 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0038] Chloride channel protein EriC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.262546 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.105647 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTATGA AATTGGATCG GCGCCGGTTC CGAGCGCTGC GTGTTTTCTT CGATCCGGGG
CGGCTGCGGG CGCTGACCCG CCGTAGCGAA GTCGGTCTGT CTCTGGCGGG CGCTGTCGTC
GGCATTGCTT CGGGTCTTGC CGTGACCGGC ATGAGCTTCG TCTCCAATGA ACTGCATCAG
CTGGTCTTCG GTATCGCCGA CAGCGAAAGG CTGAGCTCGT CGGTGATCGA CGACAAGCTG
CTGCTGCTCA CCGCCCCGGT CATCGGCGGC ATGTTGCTCG GCCTGTTGCT CTTCATCTTG
GCCAAGCGCC GCAAGAAGCC GATGGTCGAC CCGATCGAGG CCAATGCGCT GCATGGCGGC
CGCCTGTCCT TGACCGACAG CATTATCGTC GCCGTGCAGA ACCTGATCTC CAACGGTTTC
GGCGCCTCCG TCGGCCTGGA GGCCGGCTAT ACCCAGCTTG CCGCAGGCCT CGCCTCGAAA
CTCGGCCTGA AGCTGCAGCT TCGCCGTTCG GATCTCCGCG TCCTCGTCGG CTGCGGCGCA
GCCGGCGCCA TCGCCGCTGC CTTCAACGCG CCGCTGACCG GCGCCTTCTA TGCCTTCGAG
CTGATCATCG GCACCTATAC GATCGTCTCG CTGACCCCTG TAGTCGTCTC GGCCCTCGTT
TCCACCCTGA TCGCAAGGCT GCTCACCCAT GGAGATTTCA CCATCGATAT CGGCGGCTTC
GGTGCCGTCG TGCCGGCCGA TTATATCCCG GCGCTGCTGC TCGGCGTGGT CTCGGCCGGC
GTCGGCATCC TGATCATGCA GGGTGTCGCC TTCGTCGAGG AACTGGCGCG CAAGAGCGCG
ATCGCCCCGC CCTTCCGCCC GGCGCTCGGC GGCATCATCG TCGGGCTGCT GGCGATGATC
TCGCCGCAGG TGCTTTCGGC CGGCCACGGT GCATTGCATC TGAACCTTTC CCGCGATGTC
GCCATTCCGG CGCTGATCGG CCTCTTCCTG TTGAAATCCT TGGCTTCGGC GATCTCGATC
GGCTCGGGCT TCAGGGGCGG CCTGTTCTTC GCCTCGCTGT TCATGGGCGC CCTGCTCGGC
AAGCTCTTTG CCTATTGCGG CCCCTATTTT GCCGATGCGA CGCTGACGCC CGTCATTTAT
GCCGTGGTCG GCATGAGTTC GCTTGCCGTC GCCGTCATCG GCGGGCCGCT GACGATGACG
TTCCTGGCAC TCGAAATCAC TGGCGACTTC CCGATCACAG CGCTGGTGCT TGCCGCCGTC
ATCACCTCCT CGCTCGTCGT GCGCTCGACC TTCGGATACT CCTTCGCCAC ATGGCGCTTC
CATCTGCGCG GCGAAAGCAT CCGCAGCGCC CATGACGTCG GCTGGATCCG CAACCTGACG
GTGGAAAAGC TGATGCGCGC CGACGTCAAG ACGGCAAGGG CGGGCATCTC GCTCGAGGAA
TTCAAGAAGG CTTTCCCGAT CGGCTCGACC CAGCGCGTTA TCCTCGTCGA GGAGAGCGAC
AAATATGCCG GCCTCGTGCT GGTGCCGGAG ATCTACGCCA ACCCGACCGA CGCGCAGGAC
GAGGGCAAGA CGCTCGCCGA TTTCATCCAC TACCGCAACG ATTTCCTGCA GCCGCAGATG
AATGCCCGGC AGGCGGCGGC GATCTTCGAC AAGAGCGAAA GCGAAGCCCT CGCCGTCGTC
AACAACCTTA TCGAACGCAA GGTGATCGGC CAGCTCAGCG AAAGCTATAC GCTGCGCCGC
TACAGCGAGG AACTTGACCG CCGCCGCCGC GAGGTCTCCG GCGAAATTTG A
|
|---|
| Protein sequence | MLMKLDRRRF RALRVFFDPG RLRALTRRSE VGLSLAGAVV GIASGLAVTG MSFVSNELHQ
LVFGIADSER LSSSVIDDKL LLLTAPVIGG MLLGLLLFIL AKRRKKPMVD PIEANALHGG
RLSLTDSIIV AVQNLISNGF GASVGLEAGY TQLAAGLASK LGLKLQLRRS DLRVLVGCGA
AGAIAAAFNA PLTGAFYAFE LIIGTYTIVS LTPVVVSALV STLIARLLTH GDFTIDIGGF
GAVVPADYIP ALLLGVVSAG VGILIMQGVA FVEELARKSA IAPPFRPALG GIIVGLLAMI
SPQVLSAGHG ALHLNLSRDV AIPALIGLFL LKSLASAISI GSGFRGGLFF ASLFMGALLG
KLFAYCGPYF ADATLTPVIY AVVGMSSLAV AVIGGPLTMT FLALEITGDF PITALVLAAV
ITSSLVVRST FGYSFATWRF HLRGESIRSA HDVGWIRNLT VEKLMRADVK TARAGISLEE
FKKAFPIGST QRVILVEESD KYAGLVLVPE IYANPTDAQD EGKTLADFIH YRNDFLQPQM
NARQAAAIFD KSESEALAVV NNLIERKVIG QLSESYTLRR YSEELDRRRR EVSGEI
|
|---|
| |