Gene Rleg2_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_2088 
Symbol 
ID6980827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp2146397 
End bp2147158 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content59% 
IMG OID643396810 
ProductABC-2 type transporter 
Protein accessionYP_002281598 
Protein GI209549681 
COG category[S] Function unknown 
COG ID[COG1511] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0318264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.440249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCG AGGCGATCAA ATCGATCTAT TTCTTCGAGA TGGCGCGCAC GCGCCGCACG 
CTGCTGCAGA GCGTCATTTC GCCCGTCATC TCGACCTCGC TCTATTTCAT CGTCTTCGGT
GCGGCTGTGG GCTCGCGCAT CCAGGAGGTG GAGGGCGTAT CCTACGGCGC CTTCATCACG
CCGGGCCTGA TCATGCTGAC GCTGCTTGGC CAGTGCATCA GCAACGGCTC CTTCGGCATA
TATTTTCCAA AATTCACCGG CACGATCTAC GAGGTCCTCT CTGCGCCGGT GGCGATGACC
GAGATCCTGC TTGGTTACGT CGGAGCCGCC GCCACCAAGG GCATGATCAT CGGCTTCATC
ATCCTGCTCA CGGCCAATCT CTTTGTCGAC GTCAGGATCG AGCACCCCTT CATGATGATC
CTGTTCTTCC TGCTGACAGC CGTCACCTTC AGCCTGTTCG GCTTCATGAT CGGCATCTGG
GCAGGCAATT TCGAGCAGTT GAACCTCATT CCCATGCTGG TCGTACCGCC GCTGACCTTC
CTCGGCGGCA GCTTCTATTC GGTCAATATG CTGCCGCCCT TCTGGCAGGC GGTCAGCCAT
CTCAATCCGG TGCTCTATCT CGTCAGTGGC TTCCGCTGGA GTTTTTACGG GATCGCCGAC
GTCAACCCGG CGATCAGCCT GGCGATGATC ACCGTGTTCC TGGCGATATG CCTCGGCACA
CTCGGCTGGA TCTTCAAGAC TGGCTACCGG CTGCGCAATT GA
 
Protein sequence
MNVEAIKSIY FFEMARTRRT LLQSVISPVI STSLYFIVFG AAVGSRIQEV EGVSYGAFIT 
PGLIMLTLLG QCISNGSFGI YFPKFTGTIY EVLSAPVAMT EILLGYVGAA ATKGMIIGFI
ILLTANLFVD VRIEHPFMMI LFFLLTAVTF SLFGFMIGIW AGNFEQLNLI PMLVVPPLTF
LGGSFYSVNM LPPFWQAVSH LNPVLYLVSG FRWSFYGIAD VNPAISLAMI TVFLAICLGT
LGWIFKTGYR LRN