Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_2039 |
Symbol | |
ID | 6980778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 2101915 |
End bp | 2102682 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643396761 |
Product | short chain dehydrogenase |
Protein accession | YP_002281549 |
Protein GI | 209549632 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0111409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTTC TGAACGATAA GGTCGCGATC ATCACCGGCG CAAGCTCCGG CATCGGCCGC GCCGCGGCGA AACTCTTTGC ACGGGAGGGC GCCAAACTCG TGGTCACCGG GAGGCGACAA GAGGCGCTCG ACGCCGTCGT TGCCGAAATC GAGGCGGAGG GCGGGCAGGC CGTCGCCCTA TCGGGCGACG TCAGGGACGA GGCGTTGCAG GCAAGGCTTT GTGAAACGGC TGTCTCACGC TTCGGCGGGC TCGACATCGG CTTCAACAAT GCCGGCATTC TCGGCGAGAT GGGGCCGGTG GCGGAGATGT CGCCGGAGGG CTGGCGCGAG ACGATCGAGA CCAATCTGAC CGCCGCCTTC CTCGGCGCCA AACATCAGTC GGCAGCGATG AAAAACGGCG GCGGGTCGCT GATCTTCACC TCCACCTTCG TCGGCCACAC CGCCGGCATG CCGGGCATGG CCGCCTATGC TGCGAGTAAG GCGGGGCTGA TCGGCTTCGT GCAGGTGCTC GCCGCCGAAC TGGGGCGGCA GAATATCCGC GTCAACGCCC TGCTGCCGGG CGGCACCGAC ACGCCGGCCA GCATCACCAA TGCGCCGGAT GCGACGGCAG AAGTGCTCGC CTTCGTCGAG GGACTGCATG CGCTGAAGCG CATGGCCCAG CCGGAGGAGA TCGCCAATGC GGCGCTGTTC CTGGCGTCGG ATATGGCGAG CTTCGTGACG GGGACGGCGA TGCTGGCGGA TGGCGGGGTT TCGATCAGCC GGACGTAG
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Protein sequence | MTLLNDKVAI ITGASSGIGR AAAKLFAREG AKLVVTGRRQ EALDAVVAEI EAEGGQAVAL SGDVRDEALQ ARLCETAVSR FGGLDIGFNN AGILGEMGPV AEMSPEGWRE TIETNLTAAF LGAKHQSAAM KNGGGSLIFT STFVGHTAGM PGMAAYAASK AGLIGFVQVL AAELGRQNIR VNALLPGGTD TPASITNAPD ATAEVLAFVE GLHALKRMAQ PEEIANAALF LASDMASFVT GTAMLADGGV SISRT
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