Gene Rleg2_1997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_1997 
Symbol 
ID6980736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp2054202 
End bp2055605 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content64% 
IMG OID643396719 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002281507 
Protein GI209549590 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.956973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTTG CGGTCGCCCT GTTCATGGAA CAGATGGATT CGACCGTCAT CGCCACCAGC 
CTGCCGGCGA TCGCCGCCGA TATCGGCACC TCGCCGATCG CGCTGAAGCT TGCTGTCACC
AGCTATCTCG TGGCGCTGGC GATCTTCATC CCGATCAGCG GCTGGATGTC CGATCGTTTC
GGCGCGCGCA ACATCTTCCG TTTGGCGATC TTCGTCTTCA TGATCGGCTC GGTCGCCTGC
GCCTTTTCCA ATTCGATCGC GGCCTTCGTC GTCTCGCGCC TGATCCAGGG CGCCGGCGGC
TCGATGATGA CGCCGGTCAG CCGCCTGCTG CTGGTCCGGG GAACGCCGCG CCACGAACTC
GTCGATGCCA TGGCCTGGCT CACCATTCCC GCACTGATCG GCCCGATCAT GGGGCCGCCG
ATCGGCGGTT TCCTCACCAC CTATCTCAGC TGGCACTGGA TCTTCTGGAT CAATGTCCCG
ATCGGCGTGC TCGGCATCTT CCTCGTCACG CGTTTCCTGC CGGCGGTCGA GCCGCGCAGT
CCGCGGCCGA TGGATTTTCC GGGCTTCTTC CTTTGCGGCA TCGGCTTTTC CGGCTTCGTT
TTCGGCCTGT CGGTGATCAG CCTGCCGGCC GTGCCCGTCA TCTACGGCTA TGTCACGGTG
GCCGTCGGCA TCCTTGCCGG CCTCCTCTAT CTCCTGCATG CCCGCCGCAC GCCCTATCCG
CTGCTCGATC CGAAAATGTT CCGTTACCCG ATGTTCCGGG CGGCGATCCT CGGCGCCTCG
AATTTCCGCA TGGGGCTCGG CGCCCTGCCC TTTCTGATGC CGCTGATGCT CCAGCTCGGC
TTCGGCCTGA CGCCGCTGCA ATCGGGCTCA GTCACCTTCG TCAGCGCGCT CGGCTCCATG
GGGTCGAAAT TTGCCGCCTC GCGCACCTTC AATGCCTTCG GCTTCCGTAC CGTCATATCG
ATCACCACCT TGCTGGCGGC AATCTGCCTC GGCATCAACG GCTTCTTCAC CGCTGAAACG
CCGCTGCCGC TGATCATGGC CTGCCTGCTG ATCGGCGGCC TTTTCCGCTC AATGGCCTTT
TCGGGCGTCA ACGCCATGGC CTTCGGCGAT GTCGATGATG CCGACAGCAG CCAGGCGACC
GCGATCAACG CCGTTGCCCA GCGTATCTCC ATGGCGATGG GCGTGGCGAT CGCCGGCGGC
ATCCTCGAAA TTTCGAGCAG CTTTCACGGA GGCAGGCTGC TGGTCTCGGA TTTTCACACC
GCCTTCTTCA GCGTCTCGGC GATTTCGGCG CTCGCCTGCA TCACCTTCCT GCGCCTGCCG
CGCGATGCCG GCGCCGAATT GACCACGCGC CGCCGCAAAC GCCACCAGCC CGAGCCCGAA
GAGGCGATCG CGGAAAACAG CTGA
 
Protein sequence
MILAVALFME QMDSTVIATS LPAIAADIGT SPIALKLAVT SYLVALAIFI PISGWMSDRF 
GARNIFRLAI FVFMIGSVAC AFSNSIAAFV VSRLIQGAGG SMMTPVSRLL LVRGTPRHEL
VDAMAWLTIP ALIGPIMGPP IGGFLTTYLS WHWIFWINVP IGVLGIFLVT RFLPAVEPRS
PRPMDFPGFF LCGIGFSGFV FGLSVISLPA VPVIYGYVTV AVGILAGLLY LLHARRTPYP
LLDPKMFRYP MFRAAILGAS NFRMGLGALP FLMPLMLQLG FGLTPLQSGS VTFVSALGSM
GSKFAASRTF NAFGFRTVIS ITTLLAAICL GINGFFTAET PLPLIMACLL IGGLFRSMAF
SGVNAMAFGD VDDADSSQAT AINAVAQRIS MAMGVAIAGG ILEISSSFHG GRLLVSDFHT
AFFSVSAISA LACITFLRLP RDAGAELTTR RRKRHQPEPE EAIAENS