| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_1925 |
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| Symbol | |
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| ID | 6980664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | + |
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| Start bp | 1970139 |
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| End bp | 1972424 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643396648 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002281436 |
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| Protein GI | 209549519 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTGA AGAAAGCCCA TCCAGAGGCC GATGATTCCA CGGCGGCTGA GGCAGGCGTC
GGCAGCGTGG CCGATGACGA TTCCGACCTG GCGGAACGGG AGAGCCGGTG GAATCATGCG
CTCGTCGGCT CCGGCCTCGG CGTCTGGGAT CACAACTACC GTCTCGACCG GAAATATTAT
TCGCAGACCT GGAAGACCAT GCGCGGCATG GCGCCCGACG AGGAGGCCGC CGGCGATTAC
GATGCCTGGC TGGCCCTCGT TCATCCCGAT GATCGCGATT TTGTCGTCCA TGCCATCGAC
CGGCAAAATG CCGGCGATCC GGATTTCCAG ATCTTCGAAT ATCGCGAGCG CCACAGGGAC
GGCCACTGGA TGTGGATCGA CTGCCGCGGC GCCTGCGTGG AATGGGACGA GAGCGGCGTG
CCGACGCGCA TCGTCGGCAC GGATACGGAT ATTACCGCCC GCAAGGAGGC CGAGGATACG
CTGTCGCGCC TGTCGCGTCG GCTCGACCTG GCGCTGGAGA TTTCCCGCAT CGGCGTCTTT
GAAGCGGATA TCGAGAATGA CACCGTCGAA TGGGACGAGC GCCTTATCGC CATCTACGGG
CTGAAGGGCG CCTCGCGGCC AATCGCCAGC GATGTCTGGG CAAAAAGCCT GCATCCCGAC
GATCGCGAGC GCGTGCTCGG CTTGTCCGAC CGCAGCGTCG AAAGCGGCAG TGATTTTCAG
CAGGAATACC GCATCATCCG CGGCGACGGC GCCGAGCGCG TCATTCGCGC CCGCTCGGCC
TTCTTTGTCG ACGGCAACGG TCACCGCAAG CTGATCGGCG CCAATTGGGA CGTCACCGAG
GAGGTCGCGC TCCGCAACGA GCTACAGCGA GCCAAGGATC TGGCCGAGGC GCACAACCGC
GAGCTGGAAG CCGCCAAGGA GAGCATCGAG CGCCTGGCGC TGCACGATTA TCTCACCAGC
CTGCCGAACC GCCGCTATCT CGACAAGATG CTGGACGAGC GCTCGGCCGA ATGCCGCGCC
AAGGGCCTGG GGCTGGCGAT CCTGCATATC GATCTCGACC GTTTCAAGCA GATCAACGAC
ACGCTCGGCC ACCGGGCCGG CGACGCCATG CTGCAGCATG CCGCAAGCGT GCTCAGAAAT
TCCGTCCGCG CCGCCGATTT CGTGGCCCGC ATCGGCGGTG ACGAATTCGT CATCCTCTGC
ACCGTCGATC CCGCCTCGAA GAAGATCGCA AGCCTTGCCG AACGTATCAT TCGCGAATTG
CGCAAACCGG TCAGATATGA GGGCCACGAC TGCCGTTTCG GGGCCAGCAT CGGCATCGCC
GTCGACAGCG GGCCGACGCT CGACGCCAAG CAAATGCTGC TCGATGCCGA TATCGCGCTC
TATCGCGCCA AGGGCCTGGG CCGCAATCGT TTAGAATTTT TCTCCGCATC CGACCGCCGC
GACGTCATCT CGGCCAAGCA CCTTGCCGAC GAGATCCTGA TCGGCCTCGA GCGCAACGAA
TTCGTGCCCT TCTATCAGCT GCAATTCGAT GCCCGCACGC TGGATGTCGT CGGCGTCGAA
ACGCTTGCCC GCTGGCAGCA CCCCGTGCAC GGGCTGCTGG CACCAGACCG CTTTCTGGAT
ATCGCCGAGG ATCTCGACGT CGTCTCGACC ATCGACGCCC TGATCCTGGA GCGCGCCATC
GCCGATCGCC GCGCCTGGAT CAAGGACGGG CTGACCGTTC CGAAGATATC GGTCAACGTT
TCCGCCCGGC GGCTTGCCGA TCCCGATCTC GGCAAGAAGC TCCGCGCCCT GAAGATTGCG
CCCGGCACCT TCGCCTTCGA ATTGCTGGAA TCGATCTCGC TCGACGATTG CGACGAGGCG
GTCGCCGCCA ACCTGAAAAA GCTGCGCAAG CTCGGCATCG ACATTCAAAT CGATGATTTC
GGCACCGGCC ATGCATCGAT CGTCAGCCTG TTGCGCCTGA GCCCGAAGAC GCTGAAGATC
GACCGCGAGC TGATCCGGCT GCTGCCGCAA TCGGCCGAGC AGCGCAAACT CGTCGGCTCG
ATCATCGATA TCGGCCGCTC GCTGAACATC CTTGTCATCG CCGAGGGCGT CGAGACTTCA
GATCATATCC GCATTCTCGA AGAACTCGAC TGCGACACGC TGCAGGGTTA TGCGCTCGCC
CGGCCGATGC CGGCCATGCA GATCCCTTCC TTCATCCGCG CCGGCAGCTG GCGCCACGGC
CAGGTCGCCG CGCGCGCCCT GCAGACGCAG CTTCGCCGCG AGCTTCGAAG CAGATCCGCC
AAATAA
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| Protein sequence | MPVKKAHPEA DDSTAAEAGV GSVADDDSDL AERESRWNHA LVGSGLGVWD HNYRLDRKYY
SQTWKTMRGM APDEEAAGDY DAWLALVHPD DRDFVVHAID RQNAGDPDFQ IFEYRERHRD
GHWMWIDCRG ACVEWDESGV PTRIVGTDTD ITARKEAEDT LSRLSRRLDL ALEISRIGVF
EADIENDTVE WDERLIAIYG LKGASRPIAS DVWAKSLHPD DRERVLGLSD RSVESGSDFQ
QEYRIIRGDG AERVIRARSA FFVDGNGHRK LIGANWDVTE EVALRNELQR AKDLAEAHNR
ELEAAKESIE RLALHDYLTS LPNRRYLDKM LDERSAECRA KGLGLAILHI DLDRFKQIND
TLGHRAGDAM LQHAASVLRN SVRAADFVAR IGGDEFVILC TVDPASKKIA SLAERIIREL
RKPVRYEGHD CRFGASIGIA VDSGPTLDAK QMLLDADIAL YRAKGLGRNR LEFFSASDRR
DVISAKHLAD EILIGLERNE FVPFYQLQFD ARTLDVVGVE TLARWQHPVH GLLAPDRFLD
IAEDLDVVST IDALILERAI ADRRAWIKDG LTVPKISVNV SARRLADPDL GKKLRALKIA
PGTFAFELLE SISLDDCDEA VAANLKKLRK LGIDIQIDDF GTGHASIVSL LRLSPKTLKI
DRELIRLLPQ SAEQRKLVGS IIDIGRSLNI LVIAEGVETS DHIRILEELD CDTLQGYALA
RPMPAMQIPS FIRAGSWRHG QVAARALQTQ LRRELRSRSA K
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