Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1720 |
Symbol | |
ID | 6980457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 1755875 |
End bp | 1756837 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643396443 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_002281233 |
Protein GI | 209549316 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000157019 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTGA AGACTGCACT TTTGAGTGCC ACGATTCTTG CTGCCTGCAT GTTCGGTTCG GCTTCGGCCG CCGGATTGAC CGTCGGCTTC TCGCAGATCG GCTCGGAATC GGGCTGGCGC GCGGCTGAAA CGACTGTAAC CAAGGAACAG GCCAAGAAGC GCGGCATCGA TCTGAAGTTT GCCGATGCAC AGCAGAAGCA GGAAAATCAG ATCAAGGCTC TGCGCTCCTT TATTGCTCAG GGCGTCGATG CCATTCTCAT TGCTCCGGTC GTCGAAACCG GCTGGGACGA CGTTCTGAAA GAAGCCAAGG AAGCCAAGAT TCCGGTCATC CTTCTCGACC GCACCATCAA GGCTCCTGAT GATCTCTACC TGACGGCTGT CACCTCGGAC CTCGTCCACG AAGGCAAGGT CGCCGGTGAC TTCCTGGTCA AGACCGTCGG CGACAAGAAG TGCAACGTCG TCGAGCTGCA GGGCACGACC GGTTCGTCGC CGGCCATCGC CCGCAAGAAG GGCTTCGAAG AAGCTCTCGC CGGCCACGAC AACCTCAAGA TCGTTCGCAG CCAGACCGGT GACTTCACCC GCACCAAGGG CAAGGAAGTC ATGGAAAGCT TCCTGAAGGC CGAGAATGGC GGCAAGGATA TCTGCGCTCT CTACGCCCAT AATGACGATA TGGCCGTCGG CGCCATCCAG GCGATCAAGG AAGCCGGCCT GAAGCCCGGC AAGGATATCC TCGTCGTCTC GATCGACGCC GTTCCGGATA TCTTCAAGGC TATGTCCGAA GGCGAGTCCA ATGCCACGGT CGAGCTGACG CCTAACATGG CAGGTCCGGC CTTCGATGCG CTCGACGCCT ACCTGAAGGA CAAGAAGGCT CCGCCGAAGT GGATCCAGAC CGAATCCAAG CTCTATACGC CTGCCGACGA GCCGATGAAG GTCTACGAAG AGAAGAAGGG TCAGGGCTAC TGA
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Protein sequence | MKLKTALLSA TILAACMFGS ASAAGLTVGF SQIGSESGWR AAETTVTKEQ AKKRGIDLKF ADAQQKQENQ IKALRSFIAQ GVDAILIAPV VETGWDDVLK EAKEAKIPVI LLDRTIKAPD DLYLTAVTSD LVHEGKVAGD FLVKTVGDKK CNVVELQGTT GSSPAIARKK GFEEALAGHD NLKIVRSQTG DFTRTKGKEV MESFLKAENG GKDICALYAH NDDMAVGAIQ AIKEAGLKPG KDILVVSIDA VPDIFKAMSE GESNATVELT PNMAGPAFDA LDAYLKDKKA PPKWIQTESK LYTPADEPMK VYEEKKGQGY
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