Gene Rleg2_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_1708 
Symbol 
ID6980445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp1739351 
End bp1740553 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content65% 
IMG OID643396431 
Productprotein of unknown function DUF214 
Protein accessionYP_002281221 
Protein GI209549304 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.490219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTTTG AGACGCTGAA GCTGGCATTG CGCGCCATCA GCCGCAACAT GCTCCGTTCC 
TTCCTGACCG TGCTCGGCGT CGTCATCGGC GTTGCCGCCG TCATCGCGCT GGTGACGATC
GGCAACGGCA CGACCGCGCA GGTCTCGACC GAATTGTCGC GACTCGGCAC CAATATGCTG
TTCGTCCGCC CCGGCCAGTT CGGCCCCGGC CGGGCGAGCT CCGAGGCCAA GCGCTTCAGC
GTCAAGGACG TCGCTGCCAT CCGCGACCAG ATCGGCGGCC TGAGGGCCGT GGCGCCGCTC
AACCAGTCCA CGGCGACAGT CATCTCAGGC GGCCAGAACC ATTCGACCAG TGTCTCCGGC
ACCACCAACG ACTATTTCGT CGCACAGGAT TGGAACCTGG CGCTCGGCCG CACTTTTACC
CTCGCCGAGG AGCGCGGCCA GTCCCGCTGC ATCATCGGCG AAACGGTGCG CTCGCAGCTC
TTCGGCGCCG CCGATCCCAC CGGCCAGCAG ATCCGCGTCG GCAAGGTCTC ATGCCCCGTC
ATCGGCGTGC TTGCCAAGCG CGGCCAGTCC GGCATGGGCA CCGATCAGGA CGATGTCGTC
ATCATGCCGG TCAAGGTGTT CCAGCGACGC ATCAGCGGCA ACAGCAACGT GCCGCAGATC
ATCATCTCGG CGCGCGACGG GGTTTCCACA GCCAAGGTGC AGTCCGATGT CGAAGATCTG
CTGCGCGAGC GCCGCAAGAT CATCCCCGGC CGGCAGGACG ATTTCAACGT CAACGACATG
ACCCAGATCG CCGAGGCGAT GACCGGCACG ACGACGCTGC TGACCGGCCT GCTCGGCGCC
GTTGCCGCTA TCAGCCTGCT CGTCGGCGGC ATCGGCATCA TGAACATCAT GCTGGTTTCC
GTCACCGAGC GCACCCGCGA AATCGGCATT CGCCTGGCGA TCGGCGCGCT CGAAAACCAG
GTGCTCACCC AGTTCCTGGT CGAAGCCGTG GCGCTCTCGC TCTTCGGCGG AATCACCGGC
ATCGTGCTTG GCCTCAGCCT CGGCTTCGGC GCTGTGACGC TGCTGAAAGT CCCCTTCGTC
TTCAGCCCAA TGATGATCGC CGTCGCCTTC CTCTTCTCCG CCGCAATCGG CATGATCTTC
GGCTATTTCC CGGCGAGACG GGCAGCGCAG CTGAACCCGA TCGAGGCGCT GCGGCACGAG
TGA
 
Protein sequence
MFFETLKLAL RAISRNMLRS FLTVLGVVIG VAAVIALVTI GNGTTAQVST ELSRLGTNML 
FVRPGQFGPG RASSEAKRFS VKDVAAIRDQ IGGLRAVAPL NQSTATVISG GQNHSTSVSG
TTNDYFVAQD WNLALGRTFT LAEERGQSRC IIGETVRSQL FGAADPTGQQ IRVGKVSCPV
IGVLAKRGQS GMGTDQDDVV IMPVKVFQRR ISGNSNVPQI IISARDGVST AKVQSDVEDL
LRERRKIIPG RQDDFNVNDM TQIAEAMTGT TTLLTGLLGA VAAISLLVGG IGIMNIMLVS
VTERTREIGI RLAIGALENQ VLTQFLVEAV ALSLFGGITG IVLGLSLGFG AVTLLKVPFV
FSPMMIAVAF LFSAAIGMIF GYFPARRAAQ LNPIEALRHE