Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1708 |
Symbol | |
ID | 6980445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 1739351 |
End bp | 1740553 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643396431 |
Product | protein of unknown function DUF214 |
Protein accession | YP_002281221 |
Protein GI | 209549304 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.490219 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTTTG AGACGCTGAA GCTGGCATTG CGCGCCATCA GCCGCAACAT GCTCCGTTCC TTCCTGACCG TGCTCGGCGT CGTCATCGGC GTTGCCGCCG TCATCGCGCT GGTGACGATC GGCAACGGCA CGACCGCGCA GGTCTCGACC GAATTGTCGC GACTCGGCAC CAATATGCTG TTCGTCCGCC CCGGCCAGTT CGGCCCCGGC CGGGCGAGCT CCGAGGCCAA GCGCTTCAGC GTCAAGGACG TCGCTGCCAT CCGCGACCAG ATCGGCGGCC TGAGGGCCGT GGCGCCGCTC AACCAGTCCA CGGCGACAGT CATCTCAGGC GGCCAGAACC ATTCGACCAG TGTCTCCGGC ACCACCAACG ACTATTTCGT CGCACAGGAT TGGAACCTGG CGCTCGGCCG CACTTTTACC CTCGCCGAGG AGCGCGGCCA GTCCCGCTGC ATCATCGGCG AAACGGTGCG CTCGCAGCTC TTCGGCGCCG CCGATCCCAC CGGCCAGCAG ATCCGCGTCG GCAAGGTCTC ATGCCCCGTC ATCGGCGTGC TTGCCAAGCG CGGCCAGTCC GGCATGGGCA CCGATCAGGA CGATGTCGTC ATCATGCCGG TCAAGGTGTT CCAGCGACGC ATCAGCGGCA ACAGCAACGT GCCGCAGATC ATCATCTCGG CGCGCGACGG GGTTTCCACA GCCAAGGTGC AGTCCGATGT CGAAGATCTG CTGCGCGAGC GCCGCAAGAT CATCCCCGGC CGGCAGGACG ATTTCAACGT CAACGACATG ACCCAGATCG CCGAGGCGAT GACCGGCACG ACGACGCTGC TGACCGGCCT GCTCGGCGCC GTTGCCGCTA TCAGCCTGCT CGTCGGCGGC ATCGGCATCA TGAACATCAT GCTGGTTTCC GTCACCGAGC GCACCCGCGA AATCGGCATT CGCCTGGCGA TCGGCGCGCT CGAAAACCAG GTGCTCACCC AGTTCCTGGT CGAAGCCGTG GCGCTCTCGC TCTTCGGCGG AATCACCGGC ATCGTGCTTG GCCTCAGCCT CGGCTTCGGC GCTGTGACGC TGCTGAAAGT CCCCTTCGTC TTCAGCCCAA TGATGATCGC CGTCGCCTTC CTCTTCTCCG CCGCAATCGG CATGATCTTC GGCTATTTCC CGGCGAGACG GGCAGCGCAG CTGAACCCGA TCGAGGCGCT GCGGCACGAG TGA
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Protein sequence | MFFETLKLAL RAISRNMLRS FLTVLGVVIG VAAVIALVTI GNGTTAQVST ELSRLGTNML FVRPGQFGPG RASSEAKRFS VKDVAAIRDQ IGGLRAVAPL NQSTATVISG GQNHSTSVSG TTNDYFVAQD WNLALGRTFT LAEERGQSRC IIGETVRSQL FGAADPTGQQ IRVGKVSCPV IGVLAKRGQS GMGTDQDDVV IMPVKVFQRR ISGNSNVPQI IISARDGVST AKVQSDVEDL LRERRKIIPG RQDDFNVNDM TQIAEAMTGT TTLLTGLLGA VAAISLLVGG IGIMNIMLVS VTERTREIGI RLAIGALENQ VLTQFLVEAV ALSLFGGITG IVLGLSLGFG AVTLLKVPFV FSPMMIAVAF LFSAAIGMIF GYFPARRAAQ LNPIEALRHE
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