Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1616 |
Symbol | ispDF |
ID | 6980352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 1640906 |
End bp | 1642126 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643396341 |
Product | bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein |
Protein accession | YP_002281132 |
Protein GI | 209549215 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.859066 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCAAA TGCCGTCCAA GCAACCGATA TCGGCTGGAA TTGTCATCGT TGCCGCCGGC CGCGGCGAAC GTGCGGGATC CTCCAAGGAA GGCCCCAAGC AGTATCGCAT GATCGGCGGC AAGCCGGTTA TCGTGCATAC GCTTGAAAAC TTCATGACAT GGGAGCCGGC AACTGAGATC GTCGTCGTCA TTCACCCCGA TGACGAGGCG CTGTTTGCCA GAGCATTGCG CCATATCATT TCGGCAACGC CGATCGAAAC GGTGCATGGC GGGCCGACCC GACAGCAATC GGTGCTGGCC GGCCTTAGGC ACCTCAAGGA CAAGCGTATC AGCCATGTGC TGATCCACGA CGCCGTGCGG CCGTTCTTCG ACCATGTGCT TCTCGACCGC ATTGCCGAAA GCCTCGACAA TGGCGCGCAG GCGGTGCTGC CGGCGATCCC GGTCACCGAC ACGCTGAAAC GCGCCGACAG CGCCGGCACC GTGCTGACGA CGGTTTCACG CGAGCATCTT TACGCGGCGC AGACGCCGCA ATCCTTCGCT TTTGAAACGA TCCTCGATGC GCATGAGAAG GCGGCGGCAA GCGGGCGAAG CGATTTCACC GACGACGCTT CGATCGCCGA ATGGGCGGGC ATTCCGGTGA CGATCGTCGC GGGCACGCCC GATAACGTCA AGCTGACGGT CAAGAAGGAT ATCGCCATGG CGGACGACAA GCTATCGGCC TCGCTGCTTC CCGACGTGCG CACCGGCAAC GGCTACGACG TGCACCAGCT GGAAGCGGGC GACGGTGTCA CACTCTGCGG CGTGTTCATT CCGCACGACC AGAAGCTCAA AGGCCATTCG GATGCCGACG TCGCGCTGCA CGCGCTGACG GACGCGCTGC TTGCCACCTG CGGCGCCGGC GATATCGGCG ATCATTTCCC GCCCTCCGAC CCGCAATGGA AGGGGGCGGC CTCGCGCATC TTCATCGAGC ACGCCGCCCG GATCGTGCGC GAGCACGGCG GCACGATCAT GAATGCCGAT GTCTCACTGA TCGCCGAGGC GCCGAAGGTC GGGCCTCATC GCGAGAGCAT GCGGATGAGA CTGTCGGAGT ATCTCGGCAT CGATATCGAG CGCTGCTCGG TCAAGGCGAC GACCAACGAG ACCATCGGCT TCGTCGGCCG GCGCGAAGGC ATCGCGGCAA TCGCCACGGC GACCGTCGTC TATCGCGGGG TGAAACGATG A
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Protein sequence | MLQMPSKQPI SAGIVIVAAG RGERAGSSKE GPKQYRMIGG KPVIVHTLEN FMTWEPATEI VVVIHPDDEA LFARALRHII SATPIETVHG GPTRQQSVLA GLRHLKDKRI SHVLIHDAVR PFFDHVLLDR IAESLDNGAQ AVLPAIPVTD TLKRADSAGT VLTTVSREHL YAAQTPQSFA FETILDAHEK AAASGRSDFT DDASIAEWAG IPVTIVAGTP DNVKLTVKKD IAMADDKLSA SLLPDVRTGN GYDVHQLEAG DGVTLCGVFI PHDQKLKGHS DADVALHALT DALLATCGAG DIGDHFPPSD PQWKGAASRI FIEHAARIVR EHGGTIMNAD VSLIAEAPKV GPHRESMRMR LSEYLGIDIE RCSVKATTNE TIGFVGRREG IAAIATATVV YRGVKR
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