| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_1394 |
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| Symbol | |
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| ID | 6980122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | + |
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| Start bp | 1416133 |
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| End bp | 1418907 |
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| Gene Length | 2775 bp |
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| Protein Length | 924 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643396115 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002280914 |
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| Protein GI | 209548997 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.640211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGAGATA GGGCCAAGGC GGCTGGGGAT TACCTCCCCA ACGGCATCAG CACGATCACG
GTTCGGTTTT TGCTGATCGC CGTCATGCTG GCGCTGCCCG TGGCCGGATC CAGCGTCGGC
CTCGTGCAGG GGATCAACAA CAGTCTTTTC GCCAAGCGCT TCGAATGGAC GCCTCGCAGC
GCCACCGGCA ACATCGTCTT CGTTGCAATC GACAAGCACT CCCTCGATGC CGTAGGCACA
TGGCCCTGGC CGCGGCACAT CTACGCGACG CTGCTCGATA AGCTGGTCGC CTCCGGCGCC
AAGGACGTCT TCCTCGACGT CGATTTCAGC GCCTTCTCCA GCACTGAGGA GGACGAGCGT
CTGGCGGCGG CGCTCGCGAG ATCCGGAGGA GGGGTCCTTC TGCCGGTGTT CCGGCAGCAG
GAGATGGCGT CATCGTCTGA AACCGCGGTG ACAAGGCCGA TCCCGCAGCT CCTGCAGAAT
GCCTGGCCTG CATTCGCCAA CGTCGCGATG GATGCAGACG GGATCGTCCG CCGTTTCGAT
CTGGGAAGCC AGCTCGATGG AAACCCCACC CAATCCGCCG CAGCAGCCAT TGGTAGGATC
GACGGCAGTG CCGGTTCCCT GCTGATCGAC TACTCGATAA GACCCGACAC CGTCCCGACA
TTCTCCTTGT CCGACGTGCT GAACGGGACC GTGCCGGCTG ACGCAATCAG AGACCGCTCG
GTAGTGGTCG GGGCATCGGC AGCCGAGCTG AAAGACATTT TCGCCGTTCC CGTCTACGGC
GCCATCGCCG GCCCGCTCAT TCACGTGCTC GCGGCCGAGA CGCTGCTCCA GAACCGTTTC
CTCAGGATGG TCGATGAGGT TCCGCTGGAA CTCTTGTTTG CGGCCCTGCT GATCGTCGGC
GTCATCCGCA GCCGTTCAAC CGGCCTTGTC ACGATGATGG CGGTCGCACT GACCATCGTT
GCCGTCGGCG AGATCGGCGC ATTCCTGCTG CAGTGGCGGT ACGCGATCCT TATCGGAACG
GCGGTGCCGT GGTTGACGCT GCTGCTTGCG TGGATGCTTG CCCTGAACGA GCGTGTCGAC
CTCGGCCGGA TGCTTGTCGC CATCGCCAAT ACCGAGGCTC GAAACACCCG GCGGCTGATG
AGAAGGATCA TCGCCGACAG TTCGGACGGT GTCGTCGCAT TCGATAGCGA TCTGAGGATC
GTCGAGGCGA GTGAATCTGC AAAGGCGGTG CTGGGAGCCG AGATCGGCGC CTCCCTTCTC
GGCAGCACGG ACACCGCGAT CATCGACCTC GTGCGCAGGC TGGTTTCAGA GCACGACGCC
GAACCGGGTA GGGTGCACAC GGCCCTTGTC GACTTCGCCG GCAATAAGGG CTCGCAGGCG
ACGCATTACG AGGCATCAGT CACGATTTCG CCCATTGAAC AGCCGCATGC GCGTCCAGCC
GCGGCGCGAT CGCGGTTTGC CGGTTGCCTC ATCATACGGG ACATCACCGC ACGCTATGAT
TATGAGGAGC GGTTGAAGAC GATGTCCGAG CTGGACGAAC TCACCGGACT GCTCAATCGT
CGGGAATTCG CCTCTCGTCT GGCGACCCTT GAGAGCAGGG CCTTCGTCTC GGTGCTGGAT
ATCGAACGTT TCTCCTCGCT TTGCGCCACG CTTGGGCGGG ACGTCGGCGA CGAACTCCTG
AAATCCGTGG CGGCCAGACT TGGCAATGCA TTCGCCGGCA ATTTGCTGGC AAGATTGGAC
CGCGACCATT TCGGCATTGT CACCTCGGCG GCGGATGCGC ATGCGATCGA GGATTTTGCC
AACGGTCTTT TAGCGCTGTT CGAGGAGCCC GTGCTCCTCA GCGGCGCGGC CGTGCCGATC
TCGGTCCGCG TCGGAATAGC CAGCTCGGAA GATGCCGCCC CCGGCGCGCT CCTGAACGCC
GCCGAATCCG CGCTCGATGC TGCCAAGGCC CTGGCAGGCG GGCGATGGTC TTCTTTCGAT
CCTTCCGCTG CCGTTCGCCA AGCCCGCTCG CGCCGGCTAG AACGGGACAT GCGCGACGCT
CTTCGGAACC GGCAGTTCTT CCTGCGGTTC CAGCCGCAGA TCGAATTTGC GAGCGGGCGC
CTTTTAGGTG CGGAAGCCCT GATCCGATGG AACCATCCCG AGTTCGGTTT GATATCGCCG
GCCGAATTCA TTCCGATCGC CGAATCCTCC GGCTTGATCT GCGAGATCGG CCGCTGGACG
CTGTTCGAGG CCTGCAGAGA GGCCGCCGCC TGGCCCGGTG AACTCGGCGT CGCCGTCAAT
GTCTCGGCGC TTCAGTTCGA GCAATCCGAT ATCGAGGCTG ATGTGAGCGA GGCCCTATCC
GGCAGTGGGC TTCCTTCTTC CCGCCTGTGC CTGGAGCTGA CGGAATCCGC CTTCCTGGGC
AACGGTGGAG CTGTCATCGC AAAGATGTGC GCCCTTCGCG AAACAGGGGT CGTCATCGCT
TTGGACGACT TCGGGACCGG CTACTCGTCG ATGAGCTACC TTGCCGATCT TCCTCTCGAC
AAGCTCAAGA TCGACCAGTC TTTTGTCCGG CGAATGAACG CAAATCCGAA CGTATTGGAG
ATCGTCCGCG CAATCATTTC GCTGGCAAAC GGCTTGAAAC TGCAGGTCGT CGCCGAAGGC
GTCGAAACCG AGTTGGAGGC CGACGCGCTG CAACGGCTCG GATGCGAGAC GGGGCAGGGC
TATCTCTTCG GGAGGCCGGA CGAGGCTATT CGCATGCTTT CCAAATGGAA TGCTCAAAAA
CGTCTATCCG CCTAA
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| Protein sequence | MRDRAKAAGD YLPNGISTIT VRFLLIAVML ALPVAGSSVG LVQGINNSLF AKRFEWTPRS
ATGNIVFVAI DKHSLDAVGT WPWPRHIYAT LLDKLVASGA KDVFLDVDFS AFSSTEEDER
LAAALARSGG GVLLPVFRQQ EMASSSETAV TRPIPQLLQN AWPAFANVAM DADGIVRRFD
LGSQLDGNPT QSAAAAIGRI DGSAGSLLID YSIRPDTVPT FSLSDVLNGT VPADAIRDRS
VVVGASAAEL KDIFAVPVYG AIAGPLIHVL AAETLLQNRF LRMVDEVPLE LLFAALLIVG
VIRSRSTGLV TMMAVALTIV AVGEIGAFLL QWRYAILIGT AVPWLTLLLA WMLALNERVD
LGRMLVAIAN TEARNTRRLM RRIIADSSDG VVAFDSDLRI VEASESAKAV LGAEIGASLL
GSTDTAIIDL VRRLVSEHDA EPGRVHTALV DFAGNKGSQA THYEASVTIS PIEQPHARPA
AARSRFAGCL IIRDITARYD YEERLKTMSE LDELTGLLNR REFASRLATL ESRAFVSVLD
IERFSSLCAT LGRDVGDELL KSVAARLGNA FAGNLLARLD RDHFGIVTSA ADAHAIEDFA
NGLLALFEEP VLLSGAAVPI SVRVGIASSE DAAPGALLNA AESALDAAKA LAGGRWSSFD
PSAAVRQARS RRLERDMRDA LRNRQFFLRF QPQIEFASGR LLGAEALIRW NHPEFGLISP
AEFIPIAESS GLICEIGRWT LFEACREAAA WPGELGVAVN VSALQFEQSD IEADVSEALS
GSGLPSSRLC LELTESAFLG NGGAVIAKMC ALRETGVVIA LDDFGTGYSS MSYLADLPLD
KLKIDQSFVR RMNANPNVLE IVRAIISLAN GLKLQVVAEG VETELEADAL QRLGCETGQG
YLFGRPDEAI RMLSKWNAQK RLSA
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