Gene Rleg2_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_1372 
Symbol 
ID6980100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp1390652 
End bp1392184 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content60% 
IMG OID643396093 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_002280892 
Protein GI209548975 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.94557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACACT CGTTTGAATC CATTCTGGAA AACTTGCCGC AGGGCATTGT TCTCCTTGAT 
CCTGCCAATA GGGTGACGGC TTTCAATTCC CGCACGCTTG AGATTCTCGG GCTGCCGGAT
GGAGCCATCG GCAAAGGAAT GAATATCGAC CGACTGCCGG GCACCGCCGA TTGTCGCGCG
GCCGCATGCA GGCAGTCGAC GACCGGCAGG CCGCACACGT CTCAGTTTGC GCTTTCCGAC
GGACGGATGG TCTCAATGAC CTGCGCCCCA TCGAAAGAGG GAGGCTGGAT CCTCAGCTAC
GAAGACATCT CGACCCTGAT CCGCGTCGAA GACAGTCTCA CCGAACAACA TCACCGGTTC
GACGCAGCAC TCAGCAACAT GCCGCACGGC CTATGCATGT TCGATTCGAC GAAGAAGCTG
ATCCTGTGCA ACCCAGCCTA CGCGCGGATG TACAATCTGC CGGATCTCCT GACGCAACCG
GGGACGCCGC TTGTCGATAT CCTGGCCTAT CGCGGCCGCG AGGGAAATGG CCCGGCCGAC
ACCGCTACCT ATTTCGATGT GGTGTTCGAA GCAACGGCGC GCGGCGCGGT GGCCAGCCAG
AATATCGTGC TCGTTGACGG CCGCGTTATC AAAATCACCC ACAATCCGAT GCAGAACGGT
GGCTACGTGG CCACCCACGA AGACGTCACC AAAACAGTGC GGCTGACCGA AGAGCTGCGC
CGGCATCACG ATCAGCTCGA AACGACGGTG CAGAGCCGCA CAGCCGAGGT CGAGCGGCAG
GCGCGGGAAC TCGAGCGAAT GCTTGCGCAG GAGCGAAACA TCAACGAATT GCAGCGGCAG
TTCGTGGCGA TGGCCTCCCA TGAATTCCGA ACGCCGCTGG CCATCATCGA CGCTGCCGCC
CAGCGGCTGC TGCGCAAAAG AGGAGCAGTC GAGCCCGAAT TCTTGAGCGA CAAGGTCGAT
CAGATCCGCG CATCGGTGAA CCGGATCGTC GACCTGATGG AGAGTATCCT TTCGGCCGGG
CGCCTCGACA CCGGCAAGAT CGATATCAGC TATGACGCCT GCGCCTTGCG ATCATTGATC
AGAAGCTGTT GCGAGCGGCA GTCGACGATC GCCAAGACGC ACAGGTTCGT GCTGGATATC
GACGGGCTGC CGGAGTTCAT CGATGCCGAT CCCCGAACCG TGGCGCAGGT CTTTACCAAC
CTGCTGTCCA ACGCCGTCAA ATATGCGCCC GGAACCTCGG AAATTCGCGT CACGGCATGG
GAGGAGACGG GAAACGTCAA AGTTTCGATC AGCGATGACG GGGTGGGGAT CGATCCTGAA
GACGTGCCCC GGCTGTTCCA GCGCTATTTT CGGGCCGGGA CGTCGACCGG AATTGCCGGG
ACGGGCATCG GCCTCAACCT GGTGAAGCAG ATCGTCGAAC TGCACCACGG CTCGATAGAG
GTTCGAAGCG CAAGAGGCTG CGGATCGACA TTCACCGTAA CCCTTCCGAT CAAGCGAACT
GGTAACGCTT CTGAGAACAG CGACGCCGCC TGA
 
Protein sequence
MPHSFESILE NLPQGIVLLD PANRVTAFNS RTLEILGLPD GAIGKGMNID RLPGTADCRA 
AACRQSTTGR PHTSQFALSD GRMVSMTCAP SKEGGWILSY EDISTLIRVE DSLTEQHHRF
DAALSNMPHG LCMFDSTKKL ILCNPAYARM YNLPDLLTQP GTPLVDILAY RGREGNGPAD
TATYFDVVFE ATARGAVASQ NIVLVDGRVI KITHNPMQNG GYVATHEDVT KTVRLTEELR
RHHDQLETTV QSRTAEVERQ ARELERMLAQ ERNINELQRQ FVAMASHEFR TPLAIIDAAA
QRLLRKRGAV EPEFLSDKVD QIRASVNRIV DLMESILSAG RLDTGKIDIS YDACALRSLI
RSCCERQSTI AKTHRFVLDI DGLPEFIDAD PRTVAQVFTN LLSNAVKYAP GTSEIRVTAW
EETGNVKVSI SDDGVGIDPE DVPRLFQRYF RAGTSTGIAG TGIGLNLVKQ IVELHHGSIE
VRSARGCGST FTVTLPIKRT GNASENSDAA