Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1356 |
Symbol | |
ID | 6980084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 1375438 |
End bp | 1376448 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643396077 |
Product | DNA-directed RNA polymerase subunit alpha |
Protein accession | YP_002280876 |
Protein GI | 209548959 |
COG category | [K] Transcription |
COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0594219 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.591182 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCAGA AGAACTGGCA GGAACTGATC AAGCCGAACA AGGTGGAGTT CTCCTCGAGC TCGCGCACCA GGGCGACGCT TGTTGCCGAA CCGCTGGAGC GCGGCTTCGG CCTCACTCTC GGCAATGCGC TTCGCCGCGT TCTGCTCTCC TCGCTGCGCG GCGCTGCCGT CACGGCGGTG CAGATCGATG GCGTGCTGCA TGAATTCTCC TCGATTCCGG GCGTCCGCGA AGACGTCACG GACATCGTGC TCAACATCAA GGAAATCGCC ATCAAGATGG ATGGCGACGA CGCAAAGCGC ATGGTCGTGC GCAAGCAGGG CCCGGGCGTT GTCACGGCTG GCGACATCCA GACGGTCGGC GATATCGAAA TCCTCAACCC CGAGCACGTC ATCTGCACGC TCGACGAGGG CGCCGAAATC CGCATGGAGT TCACCGTCAA CAACGGCAAG GGCTACGTTC CGGCTGAGCG CAATCGTGCG GAAGATGCTC CGATCGGTCT CATCCCGGTC GACAGCCTCT ATTCGCCGGT CAAGAAGGTG TCCTACAAGG TAGAAAATAC CCGCGAAGGA CAGGTTCTCG ACTACGACAA GCTGAACATG ACCATCGAAA CCGATGGCTC GATCACCGGC GAAGACGCCG TCGCTTTTGC GGCGCGCATT CTCCAGGATC AGCTTGGCGT CTTCGTCAAC TTCGACGAGC CGCAGAAGGA AACCGAAGAG GAAGCAGTCA CCGAGCTCGC TTTCAACCCG GCTCTCCTGA AGAAGGTGGA CGAACTCGAA CTGTCGGTCC GTTCGGCAAA CTGCCTGAAG AACGACAACA TCGTCTACAT CGGCGACCTC ATTCAGAAGA CCGAAGCAGA AATGCTCCGC ACGCCGAATT TTGGTCGCAA GTCGCTGAAC GAAATCAAGG AAGTTCTCGC TTCCATGGGC CTGCACCTCG GCATGGAAGT GCCGGCATGG CCGCCCGAGA ACATCGAAGA TCTCGCCAAG CGTTACGAAG ACCAATATTG A
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Protein sequence | MIQKNWQELI KPNKVEFSSS SRTRATLVAE PLERGFGLTL GNALRRVLLS SLRGAAVTAV QIDGVLHEFS SIPGVREDVT DIVLNIKEIA IKMDGDDAKR MVVRKQGPGV VTAGDIQTVG DIEILNPEHV ICTLDEGAEI RMEFTVNNGK GYVPAERNRA EDAPIGLIPV DSLYSPVKKV SYKVENTREG QVLDYDKLNM TIETDGSITG EDAVAFAARI LQDQLGVFVN FDEPQKETEE EAVTELAFNP ALLKKVDELE LSVRSANCLK NDNIVYIGDL IQKTEAEMLR TPNFGRKSLN EIKEVLASMG LHLGMEVPAW PPENIEDLAK RYEDQY
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