Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1300 |
Symbol | |
ID | 6980024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 1323469 |
End bp | 1325127 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643396017 |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_002280820 |
Protein GI | 209548903 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000933143 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00773759 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCTCCG CCAACCGGAC TGACGAAAAA CTCGCAGAAC TCAACCAGCC GAGCCTGTGG TCCGGCATCA ACGCCTATCG GTCCGATCCG CTGATCGTCG ACCTGACGGC GGCCCTGCCG CGCGGCATCC GCGAAGACCT GGAAAACATG GGTCGCTACG TCACCTCGCC GGAGGCGCAG GAGCTGGCGC GCATGGCAAA CCAGGGCGCG CCGCAGCTGC GCACCCACGG TCCGCGCGGC GAGCGCCTCG ACGTCGTCGA ATTCCACCCC GCCTGGCACG CGCTGATGCG CCGCTCCATG TCGGTCGGCC TGCATTCCTC CGTCTGGGAT CCGCAGGCCG ATGCAGATGC CAAGGATGAG GCCCACAAGG TTCGCGCCGC CCGCTTCTAT CTGACCGCGC AGCTGGAATC CGGCCATCTC TGCCCGCTGA CGATGACCAG CGCCTCCGTT GCCGCGCTCT CGGCTTCGCC CGCCGTGCAG AAGGACTGGG CGCCCAAAAT CCTCTCGCGC AAATATGATT CGTCGAACAA ACCCGCCATG CAGAAATCCG CCGTCACCAT CGGCATGGGC ATGACGGAAA AGCAGGGCGG CACGGATGTG CGCGCCAACC GCAGCGCTGC CGAAAAGGTC AGCGAAGGCA TCTACCGACT ATCAGGCCAC AAATGGTTCA TGTCGGCGCC GATGAGCGAT GCCTTCATCA TGCTGGCGCA GACGAAGGAG GGCATGGGCT GCTTCCTCGT GCCGCGGCTG CTGGAGGATG GTTCGGCCAA CGGCCTGCAG TTTCAGCGGC TGAAGGACAA GGTCGGCAAC CGCTCCAACG CCTCTTCGGA AGTGGAGTTT TCAGACACCT TCGGCTTCCT GCTCGGTGGC CCGGATGCCG GCATCCGCAC CATTCTCGAC ATGGTGACGC TGACGCGGCT CGACTGCGCG CTGGCCTCAT CAGGCATGAT GCGTGCCTCG CTGGCCGAAG CCGTGCATCA CACCCGCGGC CGCAGCGTCT TCGGCAAGAT GCTCGTCAAC CAGCCGATCA TGACGCGCGT GCTGGCCGAC ATGGCGCTTG ACGTCGCCGC CGCCACCGCA CTGTCCTTCC GTCTCGCCGA CGCCTTCGAC AAGGCGCGCG GGAATGCCGA GCAGGCAGCC TATGCCCGCG TCATGACGCC GGTCGCTAAA TACTGGTGCT GCAAGATCGC GCCTGCGCTG ATCTACGAGG CGATGGAATG CATCGGCGGC AACGGCTATA TCGAGGAACG CCCGATCGCC CGCCATTACC GCGAAGCGCC CGTCAACGCC ATCTGGGAAG GCTCCGGCAA CGTCATGGCG CTCGACGTGC TGCGTGTGCT CAACCGCGGC AAGGATCTGT TCGAGACGGT GTTCGCTGGC CTTGCCCGCG ATCTCGGTCC CGCCGGCAAG AAGACGATCG ACGTGCTGCG CGCCGCAATC GCGCTTTGCG AACAGGATGA GGGCGCCGCG CGCCTGCTCG TCGAGCAGCT GGCGCTTGCC GCCGGTGCCG CCGAACTCTA TCGGCTGGGG GCAGGGCGCA TTGCCGATGC CTTCATCGAG ACGCGCCTTG CCGGCGGCTG GCGCTCCACC TACGGCATGC TCGATTCTCG CTTCGACGCC AGCTACATCG TCGACCTGCT CTATCCGCCA GCGGCCTGA
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Protein sequence | MTSANRTDEK LAELNQPSLW SGINAYRSDP LIVDLTAALP RGIREDLENM GRYVTSPEAQ ELARMANQGA PQLRTHGPRG ERLDVVEFHP AWHALMRRSM SVGLHSSVWD PQADADAKDE AHKVRAARFY LTAQLESGHL CPLTMTSASV AALSASPAVQ KDWAPKILSR KYDSSNKPAM QKSAVTIGMG MTEKQGGTDV RANRSAAEKV SEGIYRLSGH KWFMSAPMSD AFIMLAQTKE GMGCFLVPRL LEDGSANGLQ FQRLKDKVGN RSNASSEVEF SDTFGFLLGG PDAGIRTILD MVTLTRLDCA LASSGMMRAS LAEAVHHTRG RSVFGKMLVN QPIMTRVLAD MALDVAAATA LSFRLADAFD KARGNAEQAA YARVMTPVAK YWCCKIAPAL IYEAMECIGG NGYIEERPIA RHYREAPVNA IWEGSGNVMA LDVLRVLNRG KDLFETVFAG LARDLGPAGK KTIDVLRAAI ALCEQDEGAA RLLVEQLALA AGAAELYRLG AGRIADAFIE TRLAGGWRST YGMLDSRFDA SYIVDLLYPP AA
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