Gene Rleg2_1081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_1081 
Symbol 
ID6979800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp1101067 
End bp1101612 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content66% 
IMG OID643395793 
Productprotein of unknown function DUF1470 
Protein accessionYP_002280601 
Protein GI209548684 
COG category[R] General function prediction only 
COG ID[COG5516] Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.8882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000010734 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCTTTT CCTGGACCCC TCACCGCTTT GCCGGCGGCG CACTGGCGCT CGATGTCGCC 
AATAGCGTCG TACTGCGCCA TGATGCAACG CGGCGGATCG ACCGCTTCGC GGTTCGGGAC
CAGATGCAGG ACTTTCCGCG CGCCGCTGCC GAATTCTGCG CCGAACGGGC TCTCTTCGGC
GACATCGCGC CGGTGGCGGC GGAAAACGAG ACGGATTTCC TCGCGCTGCG GGAAGCGATC
GACCGCTATT TCCGCAAGCG TATACTGGAT GGCGGCGACG ACCAATTGCT GGCCGGGCTG
CTGGAGGCGC TGGCAAAAGT GCTGCGTGAG GCAAGCCCCG GCAGCGTGGC CGCGGCCACC
GCCCATTCGG TGCTGCGGCT GGTCGCCATG CCGGATCCGG AGCGCATGAA GATTTGCGGC
AATTGCGGCT GGCTGTTCAT CGATCGCAGC AAGAACAGGA GCCGCGCCTG GTGCGACATG
GCGGTCTGCG GCAACCGCGC CAAGGCGAAC CGGCACTACC GCCGCAAAAA GGAGGAGACG
CCATGA
 
Protein sequence
MSFSWTPHRF AGGALALDVA NSVVLRHDAT RRIDRFAVRD QMQDFPRAAA EFCAERALFG 
DIAPVAAENE TDFLALREAI DRYFRKRILD GGDDQLLAGL LEALAKVLRE ASPGSVAAAT
AHSVLRLVAM PDPERMKICG NCGWLFIDRS KNRSRAWCDM AVCGNRAKAN RHYRRKKEET
P