Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1081 |
Symbol | |
ID | 6979800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 1101067 |
End bp | 1101612 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643395793 |
Product | protein of unknown function DUF1470 |
Protein accession | YP_002280601 |
Protein GI | 209548684 |
COG category | [R] General function prediction only |
COG ID | [COG5516] Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.8882 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000010734 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCTTTT CCTGGACCCC TCACCGCTTT GCCGGCGGCG CACTGGCGCT CGATGTCGCC AATAGCGTCG TACTGCGCCA TGATGCAACG CGGCGGATCG ACCGCTTCGC GGTTCGGGAC CAGATGCAGG ACTTTCCGCG CGCCGCTGCC GAATTCTGCG CCGAACGGGC TCTCTTCGGC GACATCGCGC CGGTGGCGGC GGAAAACGAG ACGGATTTCC TCGCGCTGCG GGAAGCGATC GACCGCTATT TCCGCAAGCG TATACTGGAT GGCGGCGACG ACCAATTGCT GGCCGGGCTG CTGGAGGCGC TGGCAAAAGT GCTGCGTGAG GCAAGCCCCG GCAGCGTGGC CGCGGCCACC GCCCATTCGG TGCTGCGGCT GGTCGCCATG CCGGATCCGG AGCGCATGAA GATTTGCGGC AATTGCGGCT GGCTGTTCAT CGATCGCAGC AAGAACAGGA GCCGCGCCTG GTGCGACATG GCGGTCTGCG GCAACCGCGC CAAGGCGAAC CGGCACTACC GCCGCAAAAA GGAGGAGACG CCATGA
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Protein sequence | MSFSWTPHRF AGGALALDVA NSVVLRHDAT RRIDRFAVRD QMQDFPRAAA EFCAERALFG DIAPVAAENE TDFLALREAI DRYFRKRILD GGDDQLLAGL LEALAKVLRE ASPGSVAAAT AHSVLRLVAM PDPERMKICG NCGWLFIDRS KNRSRAWCDM AVCGNRAKAN RHYRRKKEET P
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