Gene Rleg2_1074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_1074 
Symbol 
ID6979793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp1094512 
End bp1095354 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content63% 
IMG OID643395786 
Productpolysaccharide deacetylase 
Protein accessionYP_002280594 
Protein GI209548677 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000250549 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTATCGCT TTTTCATTCT GTCCTGCATG GCCCTCACGG CCACCCTGTC TGCCTGCAGC 
ACCACCAAAC AGGCCCCGGA TACCTCGATC AAGACCTCCT CGGTGATCGC GCCCGCGGAG
CGGAAACTTG CCTTTGCCGG CGACGATGCG GCGCCGCGCA TGAGCGGGTG GCACCAACTG
GCCGGGCGGA CGCTTGAGGT CTCCTCGCTT GCCGATCTCA AGCTGCAGGA CAAGGAAGTG
ATCCTGAGCT TCGATGACGG CCCGATCCCG GGGCGGACCG ACAAGGTTTT GGCGATCCTC
GATCGGTTCG GCGTCAAGGG CGCCTTCATG ATGGTCGGCG AAATGGCCGA AATGCATCCG
GCGCTGGCCC GCAGGGTCGC CGAGGACGGC AACACGATCG GCAGCCACAC CTACGACCAC
GCCGACCTGA CTTCGCTTGA TTTCGACGCG GCAATGGCCG AGGTGGTCAA GGGCGAATTG
GCGGTGACCA AGGCGACGGG AACCGACGTC TCCTTCTTCC GCTTCCCCTA TCTTGCCGAG
AGCCACAGGC TGTGCGCCGC GATCGCCATG CGCGATCTGG TGGTCATGGA TGTCGATATC
GACAGCAAGG ACTATTTCGC CATCACGCCG GCCTCGGTGA CGCAGCGGAC GATGGACCTG
CTGCACAAAC GCGGCCGCGG CATCATCCTG ATGCATGACA TCCACAAACG CACGGCAACG
ATGCTGCCGA CCCTGCTCTC CGAACTCGAA TCCGAAGGCT ACAAGGTGGT GACGCTGAAG
CTCAAGAAGA CGCAGGCGCC GAGCAACCTC GTCGCTTCTG CCGATTTGGT GACGACCCGG
TAG
 
Protein sequence
MYRFFILSCM ALTATLSACS TTKQAPDTSI KTSSVIAPAE RKLAFAGDDA APRMSGWHQL 
AGRTLEVSSL ADLKLQDKEV ILSFDDGPIP GRTDKVLAIL DRFGVKGAFM MVGEMAEMHP
ALARRVAEDG NTIGSHTYDH ADLTSLDFDA AMAEVVKGEL AVTKATGTDV SFFRFPYLAE
SHRLCAAIAM RDLVVMDVDI DSKDYFAITP ASVTQRTMDL LHKRGRGIIL MHDIHKRTAT
MLPTLLSELE SEGYKVVTLK LKKTQAPSNL VASADLVTTR