Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1064 |
Symbol | pdxA |
ID | 6979783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 1081551 |
End bp | 1082579 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643395776 |
Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
Protein accession | YP_002280584 |
Protein GI | 209548667 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000576238 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGATAC CGTTTTCGCG ACCGCTTGCG CTGAGCCAGG GCGACCCCGC CGGCATCGGG CCGGATATTA CGCTGATGGC CTGGCTCCGG CGGCGTGAAC TCGGGCTGCC GCCTTTCTTC TTGATCGGCG ATCCCGATGT GTTGGCGTTG CGAGCCCGCC AGCTCAACCT TTCGGTTTCG ATCCGCGAGA CGGATAAAGC CAGCGAGGCT GCTGGCATGT TTGCCGATGC GCTACCCGTC ATGACGGTGC CTGCCGGTAT CGAGGTGGTT GCCGGCGAGC CGCATGCGGC AACGGCGAAG GGCACGATCG CAGCGATCGA AAAAGCCGTG TCGCTTGTCA TCACCGGCGA GGCGCTCGCG GTCGTCACCA ACCCGATTGC CAAATCAGTG CTCTACGAGG CCGGTTTCCG GTTTCCCGGC CATACAGAAT TTCTCGCTGA TCTCGCCGCC AGGGCGACCG GCAGGCCGGT GACGCCTGTC ATGATGCTGT CAGGGCCGAA GCTTCGAGCC ATTCCCGTCA CCATCCACAT TCCGGTCAGG GACGTGCCGC AGGCGCTGAC CGGCGAACTG ATCGCGGAAA CCTGCCGGAT CGCCCATGAA GATCTCAGGC AGCGCTTCGG CATCGCGGCG CCGCGGCTCG CGGTTGCCGG TTTGAACCCG CATGCGGGCG AAGGCGGGTC GATCGGCAGG GAGGACGAGG ATGTCATCCG TCCGGCGATC CAGCGCCTGC GCGACGAGGG CATCGATGCG ATCGGCCCCC TGCCCGCCGA CACGATGTTC CATGACGAGG CGCGGGCGCG ATATGACGTC GCCGTCTGCA TGTATCACGA TCAGGCGCTG ATCCCAGCCA AGGCGCTCGG TTTCGACGAC AGCGTCAACG TCACGCTCGG GCTTCCCTTC GTGCGCACCT CGCCGGATCA CGGCACCGCT TTCGGCATCG CCGGCAAGGG ACTGGCTCGC GAACAGAGCC TGGTTGCAGC GCTGAAGCTC GCCGCCCAGC TCGGCCGCAC TGCGGAAAGC CACCGCTGA
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Protein sequence | MTIPFSRPLA LSQGDPAGIG PDITLMAWLR RRELGLPPFF LIGDPDVLAL RARQLNLSVS IRETDKASEA AGMFADALPV MTVPAGIEVV AGEPHAATAK GTIAAIEKAV SLVITGEALA VVTNPIAKSV LYEAGFRFPG HTEFLADLAA RATGRPVTPV MMLSGPKLRA IPVTIHIPVR DVPQALTGEL IAETCRIAHE DLRQRFGIAA PRLAVAGLNP HAGEGGSIGR EDEDVIRPAI QRLRDEGIDA IGPLPADTMF HDEARARYDV AVCMYHDQAL IPAKALGFDD SVNVTLGLPF VRTSPDHGTA FGIAGKGLAR EQSLVAALKL AAQLGRTAES HR
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