| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_0564 |
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| Symbol | |
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| ID | 6979280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | - |
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| Start bp | 587109 |
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| End bp | 589025 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643395276 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_002280087 |
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| Protein GI | 209548170 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACACAAC TGCCGAAGAC CCCCCTGCTC GATCAGGTCA CCTACCCCGC CGACCTGCGC
AAGCTCGAGG ATCGCGACCT GCCGCAGCTG GCCCGCGAAG TCCGGGACGA AATGATCGAT
GCGGTGTCGC GCACCGGCGG CCATCTCGGC GCCGGTCTCG GCGTCGTCGA GCTGACGATC
GCTATCCACA GCGTCTTCGA CACGCCTGAC GATCGGCTGA TCTTCGATGT CGGCCATCAA
TGTTATCCGC ACAAGATCCT CACCGGCCGG CGCGACCGCA TCCGCACGCT GCGCCAGGAA
GACGGACTTT CCGGCTTCAC CCGCCGGGCC GAGAGCGAAT ACGACCCCTT CGGCGCGGCG
CACTCCTCGA CCTCGATCTC GGCCGGCCTC GGCATGGCAA TCGCCGCCGA TCTCGACAAG
AACGACCGGC GCGTCATCGC CGTCATCGGC GACGGGGCGA TGTCGGCCGG CATGGCCTAT
GAGGCGCTGA ACAATGCCGG CGCGCTCGAT GCGCGCCTCA TCGTCATTCT CAACGACAAC
GACATGTCGA TCGCGCCGCC GACAGGCGCC ATGAGCGCCT ATCTCGCCCG CCTCGCCTCG
GGCCGCACCT ATATGGGCTT CCGCGACTTC GGCAAGAAGC TGACGGCCTA TCTCGGCAAG
AATATCGACC GGGCGATCAC CCGCGCCGTC GAGCATGCCC GCGGCTATGT CACCGGCGGC
ACCATGTTCG AGGAGATGGG CTTTTATCAT ATCGGGCCGA TCGACGGGCA TTCCTTCGAC
CATCTGCTGC CGGTGCTGCG CAACGTGCGC GACAATGCCC GCGGACCGGT GCTGATCCAT
GTGGTCACCC AGAAGGGCAA GGGTTATCCG CCGGCCGAAG CCGCCGCCGA CAAATATCAT
GGCGTCAACA AGTTCGACGT CATCACCGGC GCCCAGGCCA GGGTCAAGCC GAATGCGCCG
AGCTATACCA GCGTCTTTGC CGAAGCGCTG GTGCAGGAAG CCACCCTCGA CGACAAGATC
GTCGGCATCA CCGCCGCCAT GCCGAACGGC ACCGGCCTCG ACAAGCTCGC CGAAGCCTTT
CCGTCGCGCT GTTTCGATGT CGGCATCGCC GAGCAGCATG CCGTGACCTT CGCCGCCGGC
CTTGCAGCTG AGGGATACAA GCCGTTTGCG GCGCTCTATT CCACCTTCCT GCAGCGGGCC
TACGACCAGG TCGTTCACGA CGTGGCGATC CAGGGACTGC CGGTGCGTTT TCCGATCGAT
CGTGCCGGCT TCGTCGGCGC CGACGGTCCG ACGCATGCCG GCTCCTTCGA CACCGCCTTC
CTCACCACCC TGCCCGGCTT CGTGGTGATG GCGGCGGCCG ACGAGGCCGA ACTCAAGCAC
ATGGTGCGCA CCGCCGTCGC CTATGACGCC GGGCCGATCT CGTTCCGTTA TCCGCGCGGC
GAAGGTGTCG GCGTCGACAT GCCGGTGCGC GGCGAAATCC TGCGGATCGG CAAGGGCCGC
ATCGTCAAGG AAGGCACCAA GGTGGCGCTG CTCTCCTTCG GCACCCGGCT TGCCGATTGT
CTGCTTGCCG CCGAAGATCT CGATGCCGCC GGCCTTTCGA CGACGGTTGC CGATGCCCGC
TTCGCCAAGC CGCTCGACCA CGACCTGATC CGCCAGTTCG CCCGCCACCA CGAGATGGTG
ATCACCGTCG AGGAAGGCTC GGTCGGCGGC TTCGGCAGCC AGGTGATGCA ATATCTCTCA
AGCGAAGGCC TGCTCGACAA CGGCCTGAAG ATCCGCTCAC TTGTGATGCC CGATATCTGG
ATGGAGCAGG CAAAGCCCGA AGCGATGAAC GCCCATGCCG GGCTGGATCG CGCCGGGATT
GTTTCGACCG TGTTCCGGGC GCTTGGGCGC GGGGTTGCGG TCGGGGTTGC TGGATAA
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| Protein sequence | MTQLPKTPLL DQVTYPADLR KLEDRDLPQL AREVRDEMID AVSRTGGHLG AGLGVVELTI
AIHSVFDTPD DRLIFDVGHQ CYPHKILTGR RDRIRTLRQE DGLSGFTRRA ESEYDPFGAA
HSSTSISAGL GMAIAADLDK NDRRVIAVIG DGAMSAGMAY EALNNAGALD ARLIVILNDN
DMSIAPPTGA MSAYLARLAS GRTYMGFRDF GKKLTAYLGK NIDRAITRAV EHARGYVTGG
TMFEEMGFYH IGPIDGHSFD HLLPVLRNVR DNARGPVLIH VVTQKGKGYP PAEAAADKYH
GVNKFDVITG AQARVKPNAP SYTSVFAEAL VQEATLDDKI VGITAAMPNG TGLDKLAEAF
PSRCFDVGIA EQHAVTFAAG LAAEGYKPFA ALYSTFLQRA YDQVVHDVAI QGLPVRFPID
RAGFVGADGP THAGSFDTAF LTTLPGFVVM AAADEAELKH MVRTAVAYDA GPISFRYPRG
EGVGVDMPVR GEILRIGKGR IVKEGTKVAL LSFGTRLADC LLAAEDLDAA GLSTTVADAR
FAKPLDHDLI RQFARHHEMV ITVEEGSVGG FGSQVMQYLS SEGLLDNGLK IRSLVMPDIW
MEQAKPEAMN AHAGLDRAGI VSTVFRALGR GVAVGVAG
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