| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_0477 |
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| Symbol | |
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| ID | 6979193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | + |
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| Start bp | 488816 |
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| End bp | 490885 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643395190 |
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| Product | RNA-binding S4 domain protein |
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| Protein accession | YP_002280001 |
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| Protein GI | 209548084 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.53583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.544761 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCCA AAGACAAGCC AAAACGCCCG GGCGCAAAGC CCTTTTCACG CGACAGCGGG
CCGAAGGCCG GCGCGAAGTC GGGCGGCACG AAGCCGGCAA AGGCTGCGAT CGCGGCCGAG
ACCGAAGGCG AGGCCAAGGC CGAACGCATT TCCAAGGTGA TGGCACGCGC CGGCGTCGCC
TCCCGCCGCG ACATCGAGCG CATGATCATG GAAGGCCGCG TGACGCTGAA CGGCGCGGTT
CTCGACACCC CGGTCGTCAA CGTCACGCTC GCCGATCGCA TCGAGGTCGA CGGCGTGCCG
ATCCGCGGCA TCGAGCGCAC CAGGTTGTGG CTCTATCATA AGCCGGCCGG GCTGGTGACC
ACCAATGCCG ATCCCGAAGG CCGCGCGACC GTCTTCGACA ACCTGCCGGA AGAACTGCCG
CGCGTCATGT CGATCGGCCG CCTCGATATC AACACCGAGG GCCTGCTGCT GCTGACCAAT
GACGGCGGTC TTGCCCGCGC GCTCGAACTG CCGGCCACCG GCTGGCTGCG CCGCTACCGT
GTCCGCGCCC ATGGCGACAT CGATCAGGAC GCGCTCGACA AGCTGAAGGA CGGCATCGCC
GTCGACGGCG TGCTCTACGG TTCGATCGAG GCGACGCTCG ACCGCACGCA GGGCTCGAAC
GTCTGGATCA CCATGGGTCT TCGCGAAGGC AAGAACCGCG AAATCAAGAA CGTGATGGGC
GCTCTCGGCC TCGACGTCAA CCGTCTGATC CGCATCTCCT ATGGCCCGTT CCAGCTCGGC
GACTTGCCGG AAGGCCATGT CATCGAAGTG CGCGGCCGCA CGCTTCGCGA CCAGCTCGGC
CCGCGCCTGA TCGAGGAAGC CAAGGCGAAT TTCGATGCGC CGATCTACAA TGCGCCGGCC
GTCGCCGCCG AGGAAGAGGC TGAAGCCCCA GTGCCGGAAC GGCGCGAGCA ACGTCCGCGC
CGCGACGAGG ACAAGCGCGA ACGGGCGCTG AGCCGCCTCG ACACCAAGCG CGACGATCGC
CGCGGTGGCG GGCGTAGAGA TGACGACCGC CGCGATGGCG GACGCTTCGA CGACGACAAG
CCGAAACGTC CCCAGCCGCT CGGCCAGCGC CGCAGCGCCA ATGTCTGGAT GGCGCCGGGT
GCCCGGCCGC TCGGTGAAAA GGCAGCGGCG AAAGCCGCCA AGAATGAGCA GACCGCGCGG
CGCGGCGAGC ACGCGCCGGC AAAGGGCACT GGTTCCCACC ATATCGAGGA TCGCCCGCGC
ACGCAGATCA ATCGCGTGCG CGAAGAGGAC GGCGAATGGA TCCGCTCGAG CGAGCAGCCC
AACCGTAAGG ATGAGGGCGA AGGCCGCAAG CGATCGTTCG GGGATCGGCC GGCCCGCGAA
GACCGCGGTT TTGGCGACCG CCCGGCCCGC GGCGACCGCC GCCCCCGTGA AGGGGGTGAC
GAACGTCCGC GTAGCAGAAG CTCGGCCGGC GAAGGCCGGC CGGAGCGTCC GCGCGGCGAT
CGGCCTTTCG GTGATCGTCC CTCGCGTGGT GATCGTCCCT CGCGTGGTGA TCGTCCCTTC
GGCGACAAGC CGCGCGGTGA TCGCAAACCG CGTGGCGATG GGGACGAACG TCCTCGTGCC
GCCAGAGCCT CCACCGGTGA GGCGCGTTCG GAGCGTCCGC GCGGTGACCG GCCTTTCGGC
GATCGTCCTT CACGTGGCGA CCGCCCCTTC GGCGACAAGC CGCGGGGTGA ACGCAGGCCG
CGCGAGGAGG GTGATGAGCG CCCGCGCGCA GCCAGAAGTT TTGCCGGCGA GGGCCGCTCC
GAGCGTCCGC GTGGCGAAAA ATCCTTCGGC GACAAGTCCC CAGGCGGCAG GCCTTCGAGC
GGGAAGCCTT CGGGCGATAA GCCGCGCGGC AAGGGCTTTG GCGCCAAGCC GGGCGGGGCC
AAGAGTTTTT CCGGTAAGCC GAAGGGCGCC AAGCCTGGTG GTGAAAGGGC AGGCGGCGAC
AGGCCAGGCG GCGACAGGCC TGCGGGCGGG CCGTCCAGAA GTGGTGGAAA AGGAAAGGGA
ATGACACGCG GTGCGGATCG TCGGCGGTGA
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| Protein sequence | MTPKDKPKRP GAKPFSRDSG PKAGAKSGGT KPAKAAIAAE TEGEAKAERI SKVMARAGVA
SRRDIERMIM EGRVTLNGAV LDTPVVNVTL ADRIEVDGVP IRGIERTRLW LYHKPAGLVT
TNADPEGRAT VFDNLPEELP RVMSIGRLDI NTEGLLLLTN DGGLARALEL PATGWLRRYR
VRAHGDIDQD ALDKLKDGIA VDGVLYGSIE ATLDRTQGSN VWITMGLREG KNREIKNVMG
ALGLDVNRLI RISYGPFQLG DLPEGHVIEV RGRTLRDQLG PRLIEEAKAN FDAPIYNAPA
VAAEEEAEAP VPERREQRPR RDEDKRERAL SRLDTKRDDR RGGGRRDDDR RDGGRFDDDK
PKRPQPLGQR RSANVWMAPG ARPLGEKAAA KAAKNEQTAR RGEHAPAKGT GSHHIEDRPR
TQINRVREED GEWIRSSEQP NRKDEGEGRK RSFGDRPARE DRGFGDRPAR GDRRPREGGD
ERPRSRSSAG EGRPERPRGD RPFGDRPSRG DRPSRGDRPF GDKPRGDRKP RGDGDERPRA
ARASTGEARS ERPRGDRPFG DRPSRGDRPF GDKPRGERRP REEGDERPRA ARSFAGEGRS
ERPRGEKSFG DKSPGGRPSS GKPSGDKPRG KGFGAKPGGA KSFSGKPKGA KPGGERAGGD
RPGGDRPAGG PSRSGGKGKG MTRGADRRR
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