Gene Rleg2_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_0396 
Symbol 
ID6979111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp409494 
End bp410741 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content65% 
IMG OID643395109 
ProductFAD dependent oxidoreductase 
Protein accessionYP_002279921 
Protein GI209548004 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.128604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAA ACGCAATCGT GCTCGGCGCC GGCATCGTCG GCGTGTCGAC GGCTATCCAT 
CTTCAACGGC GCGGCCGGCA GGTGACGCTG ATCGACCGCA AGGATCCCGG CAACGAAACC
TCCTTCGGCA ATGCCGGGCT GATCCAGCGC GAAGGTGTTG CGCCCTACGG CTTTCCGCAG
CAGCTCGGCC TGTTGCTGCG TTATGCGCTG AACAACCGCA TCGATGCGCA TTACCATCTG
CGCACGCTGC CGAGCCAGCT TGCCTTTCTC GCACGCTACT GGTGGAATTC GAACGCCCGG
CGCCACGCGA TCATCACCCG GGCCTATGCG CCACTGATCG AAAATTCGAT TACCGAGCAC
AAGGACCTGA TCGAAGCGTC CGAGGCGCAA GCGCTGATCC GCAGGGATGG CTGGATAAAG
ATTTTCCGCA CGCCTGCCAG GCGTGACGAA GCCCTTGGTG AGGCAGCACT TTGGCGGAAC
GAATTCGGGG TGGCATATGA CAGCCTGACC TCGGCCGATA TCGCCCGCAT GGAGCCTGAC
ATGACAGGCG ATTTTGCCGG TGGCATCCGC TGGCGTGATC CCTGGTCGGT GCTCGATCCG
CATGCGCTGA CATCAGCCTA TCGCGGCTAT TTCGAAAGCC TCGGCGGCAG GTTCGTCACA
GGCGACGCCG CCTCGCTAGG CCAGTTCGGC TCCGGTTGGA AGATCATGAC CGGGGAAGGC
CCGCTCGAAG CCGACGATGC GGTGATCGCA CTCGGCCCCT GGGCAGCGCT CGCGACGCGC
CGCCTCGGCT ATTCCTTGTC CCTCGGCGTC AAGCGCGGCT ATCACATGCA TTATGCCGCC
AAGGGCAATG CGGTGCTCAA CAACTGGATG CTCGATGCCG AACGCGGCTA TCTCCTGGCG
CCGATGCGCC GCGGCATCCG GCTGACGACG GGCGCGGAGT TCGCAACGGT TGATGCGCCG
AAGACACCGG TCCAGCTCGA CCGGGCCGAG GCGGTGGCCC GTACGATCTT CCCGCTCGGC
GACAGGCTCG ATCCCGAACC CTGGATGGGC GCCCGCCCCT GCACGCCGGA CATGATGCCG
ATCATCGGCA AAGCGCCGCG CCATCAGGGC CTGTGGTTCG CCTTCGGACA TGCCCATCAC
GGGCTGACGC TCGGGCCGGT GACCGGCCGG GTGCTGGCCG AACTCATCAC CGGCGAGACG
CCGTTCATCG ATATTGCGGC TTATGCGCCG CAGCGTTTCA ACCCGTGA
 
Protein sequence
MTKNAIVLGA GIVGVSTAIH LQRRGRQVTL IDRKDPGNET SFGNAGLIQR EGVAPYGFPQ 
QLGLLLRYAL NNRIDAHYHL RTLPSQLAFL ARYWWNSNAR RHAIITRAYA PLIENSITEH
KDLIEASEAQ ALIRRDGWIK IFRTPARRDE ALGEAALWRN EFGVAYDSLT SADIARMEPD
MTGDFAGGIR WRDPWSVLDP HALTSAYRGY FESLGGRFVT GDAASLGQFG SGWKIMTGEG
PLEADDAVIA LGPWAALATR RLGYSLSLGV KRGYHMHYAA KGNAVLNNWM LDAERGYLLA
PMRRGIRLTT GAEFATVDAP KTPVQLDRAE AVARTIFPLG DRLDPEPWMG ARPCTPDMMP
IIGKAPRHQG LWFAFGHAHH GLTLGPVTGR VLAELITGET PFIDIAAYAP QRFNP