Gene Rleg2_0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_0393 
Symbol 
ID6979108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp406915 
End bp407931 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content64% 
IMG OID643395106 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002279918 
Protein GI209548001 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.207731 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACTTC TCGAAATTGA AAATCTGACC GTCGAATTCC AGACCTCTTC AGGTCTTTTC 
CGCGCTGTCG ACCGCGTATC GCTAGCCTGC GACAAGGGCG AGATCCTGTC GGTGGTCGGT
GAATCCGGTT CAGGCAAATC CGTTGCCATG CTGGCGCTGA TGGGGCTTCT GCCCTGGACG
GCGAAGATCA CTGCCGACCG CATGCAGTTC GACGGCCAGG ATCTGCGGGG GATCTCCGGC
CGCCAGCGCC GCAGGATCGT CGGCAAGGAC ATGGCGATGA TCTTCCAGGA GCCGATGTCG
AGCCTCAATC CGTGTTTCAC CGTCGGCTTT CAGCTCGGTG AGACCTTGCG CGTCCATATG
GGCCTCAACC GGAAGGAGCG CCGCGAACGT TCGATCGAGC TTCTGAACCT CGTCGGCATT
CCGGCGCCGG AAGACCGGCT GTCGAACTTC CCGCATCAGA TGTCCGGCGG CATGAGCCAG
CGCGTGATGA TCGCCATGGC GCTCGCCTGC AATCCGAAGC TCTTGATCGC CGATGAGCCG
ACGACTGCGC TCGACGTGAC GATCCAGGCG CAGATCCTCG ATCTGCTCGT GCGCCTGCAG
AAAGAGCAGG GCATGGCGCT GGTGCTGATC ACCCACGATA TGGGTGTCGT TGCCGAAACC
GCCGAGCGCG TGCAGGTGCA ATATGCCGGC CAGAAGGTCG AGGAGCAGCC GGTAAAGGCG
CTGTTCCGCG ATCCGCACCA CCCCTATACC GCAGCCCTTC TCGCCGCCCT GCCGGAACGC
GCCCAGATCG GCCAGCGTCT TCCCTCGATC GCCGGCGTCG TTCCCGGCCA GCACGGCCGC
CCGACCGGCT GTCTTTTCGC GCCGCGCTGT GGCTACGCCA CCGTCGAATG CGATCGCGGC
GTCGTCCGCC AGGGGCCGGA GCTCGGGCTG GCTTTGTGCA ATTATCCTTT GAAGGACGGC
AAGCCGCTCG GCCATCCCGG CGTCATGGCC ACTGAAACTG CAGGAGACCT GGTATGA
 
Protein sequence
MPLLEIENLT VEFQTSSGLF RAVDRVSLAC DKGEILSVVG ESGSGKSVAM LALMGLLPWT 
AKITADRMQF DGQDLRGISG RQRRRIVGKD MAMIFQEPMS SLNPCFTVGF QLGETLRVHM
GLNRKERRER SIELLNLVGI PAPEDRLSNF PHQMSGGMSQ RVMIAMALAC NPKLLIADEP
TTALDVTIQA QILDLLVRLQ KEQGMALVLI THDMGVVAET AERVQVQYAG QKVEEQPVKA
LFRDPHHPYT AALLAALPER AQIGQRLPSI AGVVPGQHGR PTGCLFAPRC GYATVECDRG
VVRQGPELGL ALCNYPLKDG KPLGHPGVMA TETAGDLV