| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_0381 |
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| Symbol | |
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| ID | 6979095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | - |
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| Start bp | 391728 |
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| End bp | 395618 |
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| Gene Length | 3891 bp |
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| Protein Length | 1296 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643395093 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002279906 |
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| Protein GI | 209547989 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00957634 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCGCAG TCCAATATCC GTTCATCGAT ATCGCCGTGC ATGCACGGGT GCGGGAACGT
TTTTCACGCG GCGAAGCGAT GGTGCTGTTT TCGGCCGACC TTGCCCGCCT ACTCTGGGCG
AACGGTGCGG GTGCCGAACT TTTCGGCCAT GCAGCCGTCT ATGATCTGCT CGATCAGGGT
GTCGACCGCA CCGATATTAC CTTCCGCCAG CTGGAAACGG CGGCGCGCCA GCTTGCCGAT
ATCGGCGACC ACAGAAGCCT GATGATCCGC GTCGCCAAGG GCTTTCAGCG TGTGCAGGTG
CAGGCGGCGG CCGAACTGAT CCGGCTCTCG ACAGGCGAAA AGGCCATGCT GTTTTCGGTG
CCGGTCTCGG CAAAGCCGCT GACGTCAGGC GCTTCGGCGG CCCAGATGCT GCAGGGGCTC
GATGACCCCG ACACCCATAT GGCCGTGATC GGCGCCGATG GCGACGTTAT CGCCGCCTCG
CCGGGCTTTG CCTCGCTCGG GATTTCCGCG CAGACGGCAA AGACCTTGAT CAACCTTGCC
GGCGCGCATC CCGACCGGCT GGTGAAGCGA CCCGTTGCCA CCGGCAGAGG CAATCTTCCG
GCTGCCGTCG GCAAGCTCAG CGACGAGCCG GCGCTCAACC TGCTCTTTGC CGTGGAGACC
GCGATCGGCC ATCTCGACCC GATCGACGCA GCCGCGTCAG ATCCGATCGA TACCCCCGCG
CTCGACTTGA TTGATACGCC CGTGCAGGAA GAAAGCGTGC CGCCGGCCGA AGACTTCCGC
GACGAGTCCG TTGACGCCGC AGGATTTACC GAGATCATCG AGGCCGTCTC GGGGATCGAG
GAAGTCGAGG AAACGCTCGA GGACATTACC GGCGAAAACG ACCAGCCGGC GGAAAGCACA
GCGGCAACAG CAGACGAGAT GGCCGACGAA GCCGGTCTCC CCGAAGATGC CGAGCCGGAA
AGCGACGCAG GCGTGATCGA CAGCAGCGCG GATGAGGCCC ACGAGCCTGC CGCGATCATC
GAGGACGACC TTGCCTCCGT CACGCAGACG GTGGAAACGG CGACGACGGC GGAACCGCCT
GTCGAAACCG GCGAAACGCC TGTCGACGCG GCGCCGGAAG CCGTTCACGA AGAGCCCGTC
GTCGCACCGC CTATGGTCGC CGACGCCTCC CCTGCTCCTG AGCTTGTGGC TGCGCCCGGC
TTCATCTTCA GGCCGAACAG CCGCGCCACG CGCTTCGTCT GGAAGATCGA TGCCGAGGGC
CGGTTCAACG AGGTCAGCCA CGAATTTGCC GAGGCCGTCG GTCCGCATGC CTCCGAGATT
ATCGGCTCTG CCTTCGGCGA TGTCGCCGCC CTCTTCAATC TCGATTCCGA CGGCAAGCTT
GCCGAAGCGC TCGCCCGCCG CGACACATGG TCTGGTAAAA CCATTCTCTG GCCGGTCGAA
GGCACAAGCC TCGTCGTTCC CGTCGATCTG GCGGCGCTGC CGACCTATAC CCGCAACCGC
GACTTCGACG GTTTCCGTGG CTTCGGCGTC GTCCGGCTTT CCGATGCGCA GGAAGATCCG
CTGGCGCTCG GCCTGACGCT CGGCCCGGAT GGGGTCGGCC ATGATGCGGC AAGCCTCGGC
CCGGTGACCG AGACCGTTGC CGAGGCGGCA CTCGAGGTGC CGGCAGCGCA GGAAGAAGCC
CCGAGCGAAC CCGCCCTGAC GGATGAGGTC GAGGACAAGG CGCTTGCGGC AAGCGAGCCG
CAGCCGGAGA CGGAGCCTGA GGAGATTACC GCCGAGCAGG CATCTGGTGA GCGGGCGGCC
GACGAACCGC CTTTCCAGCA AAGCGCTTCA GAAACAGCAG ACGATAGCGC GGAGTCCGGC
GATATCTCCG CTGTCGATCC CGCAGCGGAA ATGTCGAACG AGCCGCCGGC GCTTCGCATT
TCGGAAACGC CCAACCGGCG TTTCTCCGAC AAGATCGTTC AGCTCCATAA CAGCGGCGCC
GCATTGACGG CCGCCGAACA GGCCAATTTC CGCGAGATCG CCAAGCGTCT CGAGGCTTTC
GGCGCCAGCA AGGACGAACC TGCTGGACCG GGACGGAGTG ACCCCGCCGC CACGGAAACG
GCGAGCTTTG AAGAGGCTTC TGGGGCCGAA GACCTCAAGG CCGAAACACC CATTGCCGAC
AAGGCGGAAG CGCCGTCGCT CGAGGAGATC GCGCCGCAGG AAGCGATTTT CGAGAATGCC
GCGGACGCCC AGCGCGACGA CGACGCTCGC GAGGACGATG CCAGTGTCGA GGCGACTGAC
GACATAGATG AGGACGAAGC GACGGAAGGG CTGGAGGAGA CGGTCAGCCA GATCGAGGTT
CTGACAAGCT TCATCCCGCC GCGCGTCAAG ATGACGGACG GGCTTTCGCT GGGAACGGTC
GACCAGTTGC CGGTCGCGGT ACTTATCCAT GTCGGCGATG CGCTGCTCCA TGCCAATCCG
GAATTCATGC GGTTGACCGG CTACACCTCG CTCGACGCAT TGCGCGAGGT CGGCGGCATC
GAAGCCCTGC TGCAGCGCCG CGAACTCGAG GAAAAGGCCG CAGGCTCCGG CACCATGATG
CTGGTCAAGG CCGACGACAG CCTGGTGCCG GTGACGGCGC GGCTGCAATC GGTGCGCTGG
GAAGACGCCA ACGCGCTGAT GCTGGCGCTG ATGCCGGTGG AAGGCAAGGA AGAGGGCCGC
AGCGATGCAG GCCGTTCCGA GGGCCGGACG GAAGCGCGGC CCGAGCGGAT GGTCGAGAAG
GTCGCCAAGC TGCAGGTCGA AGTGGAGGAA TTGCGCTCCA TCCTGGAAAC GGCGACCGAC
GGCGTCGTCG TTATCGGCAC GGAGGGCGAT ATCCGCTCGA TGAACCGGTC GGCGAGCGCG
CTTTTCAATT ACGACGAGCA GGAGACGCGC GGCAAACCCT TCGTCATGCT GTTTGCCCAT
GAGAGCCAGA AGGCTGTGCT CGACTATCTC CACGGCCTGT CCGGCCATGG CGTTGCCAGT
GTGTTGAACG ACGGGCGCGA AGTGATCGGC CGCGAAGCCG CCGGCGGTTT CGTGCCGCTG
TTCATGACGA TGGGCCAGCT CACCTCCTCC AACGGCTATT GCGCCGTCAT CCGCGATATC
ACCCAGTGGA AGCGCACCGA GGACGAACTG CGCAACGCCA AGGGCGCGGC CGAAACTGCC
AACGCCCACA AGACCGATTT CCTTGCCCGC GTCAGCCACG AGATCCGCAC GCCGCTCAAC
GCCATCATCG GTTTTTCCGA TATGATGGCC GGCGAGCGCT TCGGGCCGAT CGGCCATCCG
CGTTATATCG AATATGCCAA CGACATCGGC CGCTCCGGCC GGCACGTGCT CGATATCGTC
AACGACCTGC TCGATATTTC GAAGATCGAG GCGGGCGAGA TGGATCTCGA TTTTGCCGCC
GTCGGCCTCA ACGAGGCGGT CTCCGAAGCA GTCGCCCTGG TGCAGCCGCA GGCGAACGGC
CAGCGCGTCA TCATCCGCAC GGCGCTGTCG CATGCGGTGC CCGAGGTCGT GGCGGATCTG
CGCTCGATCA AGCAGATCGC GCTCAACATC CTGTCGAACG CCATCCGTTT CACCCCATCC
GGCGGGCAGA TCGTCGTTTC CACCTCCTAT GAGGCGAATG GCAGCGTCGT GCTGAGGGTC
CGCGATACAG GCATCGGCAT GACGCGCAGC GAACTCGACC AGGCGATGAA GCCGTTCCGG
CAGGTCTCCT CGACCCAATC GCGCCATCGC GGCGACGGTA CCGGGCTCGG GCTGCCACTG
ACCAAGGCGA TGGTCGATGC CAATCGCGCG GTGTTCTCGA TCAATTCGGC GCCGAACGAG
GGCACGCTCG TCGAGATCAC CTTTCCATCG CAGCGGGTGT TGGCCGGCTG A
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| Protein sequence | MPAVQYPFID IAVHARVRER FSRGEAMVLF SADLARLLWA NGAGAELFGH AAVYDLLDQG
VDRTDITFRQ LETAARQLAD IGDHRSLMIR VAKGFQRVQV QAAAELIRLS TGEKAMLFSV
PVSAKPLTSG ASAAQMLQGL DDPDTHMAVI GADGDVIAAS PGFASLGISA QTAKTLINLA
GAHPDRLVKR PVATGRGNLP AAVGKLSDEP ALNLLFAVET AIGHLDPIDA AASDPIDTPA
LDLIDTPVQE ESVPPAEDFR DESVDAAGFT EIIEAVSGIE EVEETLEDIT GENDQPAEST
AATADEMADE AGLPEDAEPE SDAGVIDSSA DEAHEPAAII EDDLASVTQT VETATTAEPP
VETGETPVDA APEAVHEEPV VAPPMVADAS PAPELVAAPG FIFRPNSRAT RFVWKIDAEG
RFNEVSHEFA EAVGPHASEI IGSAFGDVAA LFNLDSDGKL AEALARRDTW SGKTILWPVE
GTSLVVPVDL AALPTYTRNR DFDGFRGFGV VRLSDAQEDP LALGLTLGPD GVGHDAASLG
PVTETVAEAA LEVPAAQEEA PSEPALTDEV EDKALAASEP QPETEPEEIT AEQASGERAA
DEPPFQQSAS ETADDSAESG DISAVDPAAE MSNEPPALRI SETPNRRFSD KIVQLHNSGA
ALTAAEQANF REIAKRLEAF GASKDEPAGP GRSDPAATET ASFEEASGAE DLKAETPIAD
KAEAPSLEEI APQEAIFENA ADAQRDDDAR EDDASVEATD DIDEDEATEG LEETVSQIEV
LTSFIPPRVK MTDGLSLGTV DQLPVAVLIH VGDALLHANP EFMRLTGYTS LDALREVGGI
EALLQRRELE EKAAGSGTMM LVKADDSLVP VTARLQSVRW EDANALMLAL MPVEGKEEGR
SDAGRSEGRT EARPERMVEK VAKLQVEVEE LRSILETATD GVVVIGTEGD IRSMNRSASA
LFNYDEQETR GKPFVMLFAH ESQKAVLDYL HGLSGHGVAS VLNDGREVIG REAAGGFVPL
FMTMGQLTSS NGYCAVIRDI TQWKRTEDEL RNAKGAAETA NAHKTDFLAR VSHEIRTPLN
AIIGFSDMMA GERFGPIGHP RYIEYANDIG RSGRHVLDIV NDLLDISKIE AGEMDLDFAA
VGLNEAVSEA VALVQPQANG QRVIIRTALS HAVPEVVADL RSIKQIALNI LSNAIRFTPS
GGQIVVSTSY EANGSVVLRV RDTGIGMTRS ELDQAMKPFR QVSSTQSRHR GDGTGLGLPL
TKAMVDANRA VFSINSAPNE GTLVEITFPS QRVLAG
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