Gene Rleg2_0285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_0285 
Symbol 
ID6978999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp289482 
End bp291623 
Gene Length2142 bp 
Protein Length713 aa 
Translation table11 
GC content61% 
IMG OID643394997 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_002279810 
Protein GI209547893 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGATA GTGGCAATGT GGACCTGCAG GACCAGCGGC AGCGGCAGCG CTACCGTGGC 
TTTGCGATTG CGGTCGGCTG CCTGATGTTC CTTCTCGGAA TGAGCGCCCT TGCCGGCTGG
CTATTGCAGA TCCAGGTGAT CATTTCGCTG GTTCCCGGCT TTCCGTCGAT GGCCTTCAAC
ACCGCGCTCT GCTTCGTGCT GTCCGGCCTG GGGCTTGCCG CCTCGACGCT GGCAGCCCGT
CGTTTTCTGG TTGCCGCAAC GGTCATGACA GGGATTGCGG CGGCGATCGC CGCGGCCCGG
CTCCTGGAAA TCGTAACCAT CGGCCGGACG TTCCACAATA TCGACCTGCT GATCACCCGC
TTCGTCATTC CGCCCGATTT CATCGCGCAG ATCGGCGGCG GCATGGGCCC GAACACGGCG
CTGGTCTTCC TGATCGCCAA TCTTTCGCTG CTGTTCTCTC TCTACGTCGA GAGGAGAAGC
CAGGTGGTGC AGGAGCTGAC GAGCTACATC GTCATCACCC TCGGCATGAT CGCGCTCGCC
AGCTATGTCA CCGATGCCGA ACAGGGTTAC CGCTGGGGGC CCTATGCGGC GATGGCGCTG
CATACGGCGG TCGGCATGGT GATCTTCGGC TCAGGCCTGC TCGCGCGCTC CTGGTGGATG
CAGCCGGCAA ACCGGGCACA GATTCCGCTC TGGATCCCGG CGGCGGTCTG CTTCACCGGC
CTCCTCGTCG ATCTCTATAC GCCGCTCGGC GTTGCCAACG GCATTCTCTA TGTGCCGCTG
GTGCTGACGG CGCTGTGGTT CGGCAACAGG AATGCGCCGC TTTTCTTCGC GTTTGCCTGC
ACCGTGCTGT TGATGCTCGG CTTCTTCGCC GTCAGGCACA ACGAGGCGGC ATTCTGGCAG
GAGATCGCCA ACCGCACGAT TACGGCTGCG ACGCTCTGGC TGATCGCCAT CCTCGTCTTT
TATTTCATGC GCAACAATCA TAACCTCGAA ACCGAGCGCG TCCGTTTCGG CGCGCTGGTG
CGCGGCACGC CCGATGCCGT CATCGTCATC GACGAGAGTG GAACGATCAG GAGCTTCAAC
CCGGCGGCTG AAAGCATGTT CGGTTATACC CCGCAGGAGA CGATAGGCCG GAATATCAAG
ATGCTGATGC CCGAACCCTA CCATTCCGAG CACGACGGCT ATCTCGCCCA TTACCGGAAG
ACCGGTGAGG AGCGCATCAT CGGCACGACG CGCATGGTCT CCGGGCGCCG CAGGAACGGC
ATCGTCTTTC CGATCGACGT TTCCATCAGC GCCGTTTCCA CCGGCGATGC GAAGATCTTC
GTCGGCATCG TGCGGGATAT CAGCGAGCGC GCCCGACAGG AAGAGCGGAT GAAAACGACG
CTTGCCCAGC TCGAGGCCTA TACGGCCGAA CTCGAGCGCA GCAATCACGA CCTCGACGAA
TTCGCCTATA TCGCCTCGCA TGATCTCAAG GAACCGCTGC GCGGCCTGCA CAACCACTCC
CGATTCCTGC TGGAGGACTA CGAAGACAAG CTCGACGACG ACGGCGTGCG CCGGCTGAAC
CGGCTGGTGC GCCTCAGCCA GCGCATGGAA AAACTCGTCA ACGACCTGCT GTATTTCTCC
CGGCTCGGTC GGCAGCAGCT GGCGGTCAAA CGCAGCGACA TCGGCCTGAT CGTCAAGGAT
GTCGTCGCGA CCATGGAACT GCTGCTCGAG GAACGCCATG CCAAGGTCAT CATCGACGGC
CAGTTGCCGG ATGTGGTCTG CGACGCTCCG CGGCTGACCG AGGTATTCCG CAATCTCATC
ACCAATGCGA TCAAATACAA CGACAAACCG GCGCCGCTGG TGTCGATCGG CTATCTCGAT
CGGTTCGTCG GCCAGGACGG CACGATTGCC CGCAACGTGT TTTTCGTCCG GGATAACGGC
AAGGGCATAC CCCAGGAATT CCATGAGGAC ATTTTCCGCA TTTTCAAACG GCTGGAAAAA
TCGCAGGATT CCGACGACGG CACCGGAGCA GGCCTCACCT TCGTCCGCAA GATCATCGCC
CGGCACAATG GCGATATCTG GCTGGAATCC GAGGTCGGCA CCGGCACCAC ATTCTACTTC
ACTCTGGGAA AAAAGCGCGA GGGGCAGAAT GCAGCAGCGT GA
 
Protein sequence
MQDSGNVDLQ DQRQRQRYRG FAIAVGCLMF LLGMSALAGW LLQIQVIISL VPGFPSMAFN 
TALCFVLSGL GLAASTLAAR RFLVAATVMT GIAAAIAAAR LLEIVTIGRT FHNIDLLITR
FVIPPDFIAQ IGGGMGPNTA LVFLIANLSL LFSLYVERRS QVVQELTSYI VITLGMIALA
SYVTDAEQGY RWGPYAAMAL HTAVGMVIFG SGLLARSWWM QPANRAQIPL WIPAAVCFTG
LLVDLYTPLG VANGILYVPL VLTALWFGNR NAPLFFAFAC TVLLMLGFFA VRHNEAAFWQ
EIANRTITAA TLWLIAILVF YFMRNNHNLE TERVRFGALV RGTPDAVIVI DESGTIRSFN
PAAESMFGYT PQETIGRNIK MLMPEPYHSE HDGYLAHYRK TGEERIIGTT RMVSGRRRNG
IVFPIDVSIS AVSTGDAKIF VGIVRDISER ARQEERMKTT LAQLEAYTAE LERSNHDLDE
FAYIASHDLK EPLRGLHNHS RFLLEDYEDK LDDDGVRRLN RLVRLSQRME KLVNDLLYFS
RLGRQQLAVK RSDIGLIVKD VVATMELLLE ERHAKVIIDG QLPDVVCDAP RLTEVFRNLI
TNAIKYNDKP APLVSIGYLD RFVGQDGTIA RNVFFVRDNG KGIPQEFHED IFRIFKRLEK
SQDSDDGTGA GLTFVRKIIA RHNGDIWLES EVGTGTTFYF TLGKKREGQN AAA