Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_0194 |
Symbol | |
ID | 6978906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 193230 |
End bp | 194570 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643394905 |
Product | MATE efflux family protein |
Protein accession | YP_002279720 |
Protein GI | 209547803 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACGC ACAATAACAG GTTCGCCTTC GAGGTGACGC ACCGGCTGGT GCTGTCGATC GCCATTCCGA TGACGCTCGG CTTCATGACG ACGCCGATGC TCGGGCTGAC CAACACCGCC GTCGTCGGCC GTATAGGCGA CCCGGAAGCG CTGGCGGGGC TGGCGATCGG TGCGATGCTG TTCGATCTGA TCATGGGCAG CTTCAATTTC CTGCGCGCCT CGACGACCGG ACTGACGGCG CAGGCCTATG GCCGGCGCGA TCAGCACGAG CAGCAGGCGG TCTTCTCCCG GGCGCTGATT TCGGCGCTCG GCTGCGGGCT GGCGCTGCTC TGTCTTTCGC CGCTGCTGAA TGCGGCGGGC TTGCGGCTGA TGGGGGCGGA AGGCGCAATC GCTGAGGCGA CCAGCACCTA TTTCTCGATC CGGATTCTCG CTGCACCGGC TGCGCTCGCC AATTACGCCA TCCTCGGCTT CGTGCTCGGG CGCGGACAGG GCAAGATCGG GCTGCTGCTG CAGGCGATCA TCAACGGCAT CAATATCCTG CTGTCGATCT ATCTCGGTCT GACCCTCGGC TGGGGCGTGG CGGGGGTCGC CTGGGGAACG ATGGCCGGCG AGACGGCCGG CGCCCTTGCC GGGCTTTTCA TCGTGCTTAG CGGCTTTGCC AAGGCCGAGC GGCCGGCATG GGCGGAGATC TCTTCGCGGC ATCGGCTGGC CGAGCTTTTC GCCCTCAACC GCGACATCCT GATCCGCACC TTCGTGCTGA TCGGCGCCTT CACCATCATG ACGCGGATCG GCACCAGTTT CGGCGCCGTC ACCCTTGCCG CCAATGCCGT GCTGATGAAT TTCGTCCTGC TCTCCAGCTA TTATCTCGAC GGGCTTGCCA ATGCCGCCGA GCAGATCACC GGCCGGGCGA TCGGCGCACG TTACCGGCCG GCCTTCGACC GCGGGCTGAA GCTGACGATC CTGTGGTCCT TCGGCCTGGC AGCGATCGTT TCCGCCTTTT TCTTCCTCGC CGGTCCCTGG CTGATCTCGG TGCTGACGAC CTCACCCGAG GTGCGGCAGG CGGCAGCGGC CTATCTGCCC TGGGCGGCGG TGACCGGGTT GACCGGCGCG CTCGCCTTCC TGATGGACGG GGTCTTCATC GGCGCCACAT GGTCGGCCGA GATGCGCAAC CGGATGCTGA TGTCCTTTGC CGGCTATCTG CTGATGCTCG CCGTCTTCGT GCCGCTCTTC GGCAATCACG GCCTGTGGCT TGCTATGAAC GCCTTTCTGC TCTTCCGCGG CTTTTTCCTG GCGCTGCTGG TCAAGCCGCG GGCCGATCAG ACTTTTCGCG CCGCCCAGTA A
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Protein sequence | MDTHNNRFAF EVTHRLVLSI AIPMTLGFMT TPMLGLTNTA VVGRIGDPEA LAGLAIGAML FDLIMGSFNF LRASTTGLTA QAYGRRDQHE QQAVFSRALI SALGCGLALL CLSPLLNAAG LRLMGAEGAI AEATSTYFSI RILAAPAALA NYAILGFVLG RGQGKIGLLL QAIINGINIL LSIYLGLTLG WGVAGVAWGT MAGETAGALA GLFIVLSGFA KAERPAWAEI SSRHRLAELF ALNRDILIRT FVLIGAFTIM TRIGTSFGAV TLAANAVLMN FVLLSSYYLD GLANAAEQIT GRAIGARYRP AFDRGLKLTI LWSFGLAAIV SAFFFLAGPW LISVLTTSPE VRQAAAAYLP WAAVTGLTGA LAFLMDGVFI GATWSAEMRN RMLMSFAGYL LMLAVFVPLF GNHGLWLAMN AFLLFRGFFL ALLVKPRADQ TFRAAQ
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