| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_0080 |
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| Symbol | |
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| ID | 6978789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | - |
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| Start bp | 77463 |
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| End bp | 79256 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643394791 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_002279609 |
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| Protein GI | 209547692 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0122237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.388079 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAA ACCGCAATTA CTTCATTGCG ATCGCTCTCT CGGTGCTGAT CGTCCTCGGC
TGGCAGTTTC TCTATATGAA TCCGCGCATC GAGGCCCAGC GCAAGGCGCA GGAAGCCCAG
AAGGCGCAGC AGAAAACCGA ACAGGTGCAG CAGCCCGCAG CAAACGGCGC GGCGCCGGCG
CCGACGAGTG GGACCGCCCC CTCGGGTCAG GCCGTCGCCA CGGCGACGCT CGAACAGGCG
CTGGCAAAGA ACCCGCGCGT CGTCATCGAT ACGCCTGCGC TTTCCGGCTC GATCAACCTC
GCCGGCGCCC GGCTCGACGA CCTGAAACTC AAGGGCTATC ACGAGACCGT CGACGACTCG
AGCCCAACCA TCACCCTGTT CAGCCCGGCG GAAACCAAGG ACGGTTACTT CACCGAGCTC
GGCTATATCG GCAGCGACGC CACGGGCAAC GTTCCCGGCG CCTCGACGCT CTGGACGGCG
CCCGAGGGCG CCAAGCTCAC CGACAAGACG CCGGTGACGC TCTCCTATAC CAACGACAAG
GGCCTGACCT TTACCCGGAC GATTTCCGTC GACGAACGCT ACATGTTCAC CGTCGCCGAC
AAGGTCGAAA ATACCGGCCA GGCTCCGGTA TCACTGTCTT CCTACGGCCG CGTGACGCGT
TACAACAAGC CGACGACGCC CTCCGTCTAC GTGCTGCATG AAGGCTTCAT CGGCGTCATC
GGCGATGACG GCCTTGTCGA AACCAAATAT ACCGCCGCCG AGAAGGAAGC CGTCATGCCG
CCGAAATCCA CCGGCGGCTG GCTTGGCATT ACCGACAAAT ACTGGGCCGC GACGATCATT
CCGCCGCAGA CGTCGGCCTA TGAAGCACGC TTCTCGCATT TTGCCGATGG TCAGCCGCGC
TATCAGGCCG ATTACAAGGA CGATGCCTTC ACCGTTGCGC CGGGCCAATC GATCGAGCTC
AAGAACCTCG TCTTCGCCGG CGCCAAGGAA GTGCCCGTCA TCGACGGCTA CGAGACCAGC
TATTCGATCC CGAAGTTCGA CCGGCTGATC GACTGGGGTT GGTTCTATTT CATCACCAAG
CCGATGTTCA AGCTGATGGA CTTCTTCTAT CGCTTCTTCG GCAATTTCGG CGTGGCGATC
CTGTGCACCA CCATCGTCGT CAAGGCGCTG TTCTTCCCGC TCGCCAGCAA GCAATATGCT
TCGATGGCGA ACATGAAGCG CATGCAGCCG AAGATGGAGG AGCTGAAGGC GAAATTCGCC
GACGACCGCA TGGGGCTGCA GCAGGCGACG ATGCAGCTCT ACAAGGAAGA GAAGATCAAC
CCGATCGCCG GCTGCTGGCC GGTGGCGCTG CAGATCCCGA TCTTCTTCTC GCTCTACAAG
GTGATCTACA TCACCATCGA GATGCGGCAC GCGCCGTTCT TCGGCTGGAT CAAGGACCTT
TCGGCCCCCG ATCCGACGAC GATCGTCAAT CTGTTCGGCC TGCTGCCCTT CGAAGCGCCG
ACCATCCTGC ATCTCGGCGT CTGGCCGCTG ATCATGGGCG TCACCATGTT CCTGCAGATG
CGCATGAACC CGACGCCGCC CGATCCGACC CAGGCGATGA TCTTCACCTG GATGCCGCTG
GTGTTCATGT TCATGCTGGC AAGCTTCCCG GCCGGCCTGG TCATCTACTG GGCCTGGAAC
AACACGCTCT CGGTGATCCA GCAGTCGGTG ATCATGAAGC GCCAGGGCGT CAAGGTCGAA
CTCTTCGACA ATCTGAAGGG CCTGTTCCGG CGAAAAACGG CGCCGTCGAA ATGA
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| Protein sequence | MEKNRNYFIA IALSVLIVLG WQFLYMNPRI EAQRKAQEAQ KAQQKTEQVQ QPAANGAAPA
PTSGTAPSGQ AVATATLEQA LAKNPRVVID TPALSGSINL AGARLDDLKL KGYHETVDDS
SPTITLFSPA ETKDGYFTEL GYIGSDATGN VPGASTLWTA PEGAKLTDKT PVTLSYTNDK
GLTFTRTISV DERYMFTVAD KVENTGQAPV SLSSYGRVTR YNKPTTPSVY VLHEGFIGVI
GDDGLVETKY TAAEKEAVMP PKSTGGWLGI TDKYWAATII PPQTSAYEAR FSHFADGQPR
YQADYKDDAF TVAPGQSIEL KNLVFAGAKE VPVIDGYETS YSIPKFDRLI DWGWFYFITK
PMFKLMDFFY RFFGNFGVAI LCTTIVVKAL FFPLASKQYA SMANMKRMQP KMEELKAKFA
DDRMGLQQAT MQLYKEEKIN PIAGCWPVAL QIPIFFSLYK VIYITIEMRH APFFGWIKDL
SAPDPTTIVN LFGLLPFEAP TILHLGVWPL IMGVTMFLQM RMNPTPPDPT QAMIFTWMPL
VFMFMLASFP AGLVIYWAWN NTLSVIQQSV IMKRQGVKVE LFDNLKGLFR RKTAPSK
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