Gene Rfer_4488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_4488 
Symbol 
ID3959987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007901 
Strand+ 
Start bp248829 
End bp249575 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content55% 
IMG OID637909695 
Productlytic transglycosylase, catalytic 
Protein accessionYP_516171 
Protein GI89885973 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCGGC CTCGGGATGA TCTTCGCTAT CGCTTTTCCG ATATTTTTCG CATTAGCTGG 
TTTGTCGACC TGGGCGCTGG TCGAGATGCG GGGGCCGATT GTTTCCTCGC TGAAGCACCT 
GAGCATCCAC TAAAGGTCGA GAGTTCCTGC AGAATCAGGA AGCAAAAACG GCTGGCGGCA 
GCAGCGATGG CGCTGGCCGC CCTTTCGTTT AGTGCGCCTT TGGCGGCGAA GACACCCGAG 
CAGGAAGCCA AGGTGGAATA TGCAACCCGG TGCATCGCCC CTGCGGCTGA ATTCCATAAA 
GTGAATGCGT GGGTGCTCAA AGGCATCTTG AAAGTTGAGT CGGCCTTCAA CGCGGGCGCG 
ATCAATCGCA ATCAGAACGG ATCAACTGAC GTTGGTATCG GCCAGATGAA CTCGATTCAC 
TTCAAGGAAC TTTATGGGTA TGGCATTGCC CCCAATGATC TGCTAGACCC TTGTGTCGGC 
ACCTATGTTG CGGCTTGGCA TCTGGCAAAA CAATTGAAGG TTTACGGCAA CACCTGGTTC 
GCGATTGGCG CTTACCACAG CGCCACACCA TATTTCAATG CACGCTACCA GGCGCTGGTC 
TACAACGCCT TGATCAGTAT GGGTGTCGTG TCGGGGGCCC GTCTCAGTGT TGCTCCACTC 
AATGTTGGTC CCACATCGAG CCGGCGGGCG GCCATCAGGA AGGTTTCGCC TTCCCAAGCC 
TCGGCGATTC TTGCCACTTT AGAATGA
 
Protein sequence
MDRPRDDLRY RFSDIFRISW FVDLGAGRDA GADCFLAEAP EHPLKVESSC RIRKQKRLAA 
AAMALAALSF SAPLAAKTPE QEAKVEYATR CIAPAAEFHK VNAWVLKGIL KVESAFNAGA 
INRNQNGSTD VGIGQMNSIH FKELYGYGIA PNDLLDPCVG TYVAAWHLAK QLKVYGNTWF 
AIGAYHSATP YFNARYQALV YNALISMGVV SGARLSVAPL NVGPTSSRRA AIRKVSPSQA 
SAILATLE