| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4327 |
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| Symbol | |
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| ID | 3959863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007901 |
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| Strand | + |
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| Start bp | 88990 |
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| End bp | 92502 |
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| Gene Length | 3513 bp |
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| Protein Length | 1170 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637909534 |
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| Product | hypothetical protein |
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| Protein accession | YP_516011 |
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| Protein GI | 89885813 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1002] Type II restriction enzyme, methylase subunits |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAA AGAATACAAC AGCGGCGTTC ATTAAAAGCT GGCAGGGAGT TGCAGCAAGC
GAACTGGCCA CCGCTCAGAG TTTCGTCATG GACTTTTGCG AGTTACTGGG GGTCGCAAAA
CCGCACGCAA CACCCGAGCA GGAATACATG TTTGAGCGTC CAGTGACCTT CGCGCATGGG
GACGGTTCCA ACAGCGCCGG TCGTATTGAC TGCTACAGGC GCGGTCACTT CGTGCTGGAA
GCCAAGAAGC TACGGGCGGG AGCCCATACC AAGGGTTTCG ACGACGGCCT GCTTCGCGCC
CGCAGTCAAG GCGAGGCTTA CGCGCGCGCT TTACCCGCAG CGGATGGTCG CCCGCCCTTT
GTGCTGGTAG TTGATGTTGG CACCGTCATC GAGGTCTATG CCGAGTTCAG TCGAAGCGGC
GGTACCTACA CACCGTTCCC GGATCCGCGC AGCCATCGCA TTGCACTGGC CGATTTGGCG
CGGCCCGAGA TACTGGAGCG GCTGCGTCGC ATTTGGGTCG ACCCGGAAAG CCTCAACCCG
GCACGCATCA GCGCCGAAGT CACCCGCAAG GTTGCACAAC GCCTGGCGTT GCTGGCCCGC
TCACTTGAGC AGGCGGGCCA GTCGGCCCAA CACGTTGCGG CCTACCTCAC GCGTTGTCTG
TTCAGCATGT TTGCCGAAGA CGTCGCGCTT CTGCCTCAAG GCGCTTTTTT GGGTCTGTTG
CAAACCCACC GGAAAGACCC AGCGGCACTG CAGCAGATGT TGCGCATCTT GTGGGCTGAC
ATGGATATTG GCGGCTTCTC GGCCGCGCTG GTCAAGCCGG TACTCAAGTT CAATGGCAAG
CTTTTCAAGG GTGCGAACGT CGACGGCTAC AGTTTGCTCC TGACGACCGA ACAAATCGAC
CTGCTGATTT TGGCGGCGCA GGCGAACTGG CGCGAAGTTG AGCCTGCCAT TTTCGGCACA
CTGCTGGAGC GTGCGCTGGA CCCGGCTGAA CGCCATGCCT TGGGCGCCCA CTACACCCCG
CGGGCCTATG TGGAGCGCTT GGTATTGCCT ACGGTGATGG AGCCATTGCG CGCAGAGTGG
GCCAATGCCC AGGCGGCGGC GCTGCTGCTG GCCCACGAAG CCGCAACGCT GGAAGCGAAT
CCGCCTGCAG TCAAAACCAA AAAAGACTTC TTAGCCCTGG ACCGCCACAG CGCATCCGTG
CGCGGCAAGT GGCGCGATGC CCGCCAACAG GTCAAGGACT TTCATCACCG CCTGTGCACA
CTGCGCGTTC TGGACCCTGC CTGCGGTAGT GCCAACTTTT TGTATGTCAC GCTGGAACAC
CTCAAGCGCT TGGAAGGTGA GGTTCTTAAC CAGCTCAGTG CCTTGGGCGA TACGCAGGAC
TCTTTAGACC TGGGCCGTGA GACTGTGAAC CTGCAACAGT TGCGTGGTAT TGAACTGAAC
GAGCGTGCTG CTGCCCTCGC AGAATTGGTT CTTTGGATTG GATACCTGCA ATGGCATATT
CGGTCCTTCG GCAATGCCGG CGTTGCCGAG CCCGTGGTGC ATGACTACGG CAACATCGAG
CATCGGGACG CCGTGCTGGA CTACGACCGC GTGGAGCCGA TGACGGACGA GGCCGGTAGC
CCGATAATGC GCTGGGATGG CGTGACCACC AAGACCCACC CGGTGACGGG GCAGCAGGTG
CCGGACGATG CTGCACAGGT GGTTCAATGG CGCTATATCA ACCCACGGCA GGCGCAATGG
CCGGTCGTTG ACTTCATTGT GGGCAATCCA CCATTCATTG GCGCGGGAGC CATGCGCGGC
GCATTGGGTG AGGGTTACGT GGATGCCTTG CGTGGCGCAT GGCCCAAAGT ACCAGAGAGC
GCGGACTTCG TCATGTACTG GTGGCATCGC GCCGCCGAAA TGGTGAGTGC TGGGCAGGTG
CAGCGTTTTG GTTTCATCAC TACCAATAGT TTGCGCCAAA CCTTCAACCG ACGCGTGGTG
CAGACGGCGT TAACTGATGG CCTGTCTCTG CTGTTTGCCG TGCCTGACCA TCCGTGGGTG
GACAGTGCCA ATGGCGCAGC GGTGCGCATT GCCATGACCG TGGCGGGTGC CGGTCAGAGC
GACGGAAAGT TGCTGACGGT TCAAAGCGAG CAAGTGAGCG AGCACGGCGA AGTGCAGGTG
GACATGGCGC AGACCGTGGG CTTAATACAT CCCGACCTTC GAATTGGTGC AAATGTTGCT
GCATCCGTTG GCATGCGCTC AAACATGGAC TTGAGTAACA GAGGTGTGCA GCTTTTTGGA
GCAGGGTTCA TTGTCAGCCC AGAAGAAGCA GCAGCCCTCG GCTTGGGGAG CGTGGCGGGC
CTTGAGAAAC ATGTTCGCCA GTACCGCAAC GGGCGCGACC TGACCAGCAC ACCGCGTGGC
GCGATGGTTA TCGACATGTT TGGGCTGGGT GTTAATGACG TTCGGGCGAA GTACCCCGCT
GCCTATCAGT GGCTGTTGGA GCGCGTCAAA CCGGAACGTG ACCAGAACAA CCGTGCGACT
TACCGCAACA ATTGGTGGTT CTTTGGAGAG CCACGACGAG TGTTGCGTCA TCAGCTCAAT
GGTTTGTCGC GCTACATCGC GACCGTGGAG ACGGCCAAAC ACCGGGTATT CCAATTCTTG
GATATCAGCG TTCTGCCTGA TAACAAGCTG GTTGCCATCG CTTTGAGCGA TGCCCTTCAA
CTTGGGGTGC TCTCCAGCGC CGCGCACGTT GCATGGGCGG TGGCGGCAGG CAGCACGTTA
GAAGACCGTC CGGTCTACGT GAAAACCACC TGCTTTGAAA GGTTCCCATT CCCCGGCGAG
GACACAGGGC TAACCCCTCA GTTGACAGAG CGCATTCGTA GTCTGGCAGA GCAATTGGAT
GCCCACCGCA AATCCCGTCA AGCCGCCCAC AGCACCGTGA CCATCACGGG CCTGTACAAC
GTGCTGGATA AGCTGCGCAG TGGCGAGACT TTGACCGCCG CCGAGAGAAA TTTAAACGAC
AACGGCTTGG TAGGCGTGCT GCGCAGCCTG CACGACGAGC TGGACGCTGC GGTGCTGTCT
GCTTACGGCT GGGGTGACCT GTCATTGCCA GCCGATACGG ATGCACTGCT GCTGCGCCTG
GTGGAGCTGA ACACCAGGCG AGCCAATGAA GAAGCTGCGG GCCTTGTGCG TTGGTTGCGG
GCAGACTTCC AGAGCGGCAC GGGGCAAGGT GAGCAAACCT CCATTGAAGG TGCGACCGAA
GCCGACGAGG ACGGTGACGC GGTCAAGCCA GTGGCAGCCA AAGTTGCTGT TGCGCAGAAG
CCGTGGCCTA GCGGGTTGGC AGACCAAATC AAGGCCGTGG CCGACATACT GGCAGATTCC
GGTACGAGTC TCGACCTTGA CGGCCTTGCA TCGCGCTTCA GCAACAAGGG GCGTTGCCGT
GAACGCATTC CAATCATCTT GGATGCCCTG GTCGCCATTG GGCGAGCGCG CGTGCAGTCT
GATGGCCGAT GGATAGATTC AGGTTTCAAC TGA
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| Protein sequence | MDKKNTTAAF IKSWQGVAAS ELATAQSFVM DFCELLGVAK PHATPEQEYM FERPVTFAHG
DGSNSAGRID CYRRGHFVLE AKKLRAGAHT KGFDDGLLRA RSQGEAYARA LPAADGRPPF
VLVVDVGTVI EVYAEFSRSG GTYTPFPDPR SHRIALADLA RPEILERLRR IWVDPESLNP
ARISAEVTRK VAQRLALLAR SLEQAGQSAQ HVAAYLTRCL FSMFAEDVAL LPQGAFLGLL
QTHRKDPAAL QQMLRILWAD MDIGGFSAAL VKPVLKFNGK LFKGANVDGY SLLLTTEQID
LLILAAQANW REVEPAIFGT LLERALDPAE RHALGAHYTP RAYVERLVLP TVMEPLRAEW
ANAQAAALLL AHEAATLEAN PPAVKTKKDF LALDRHSASV RGKWRDARQQ VKDFHHRLCT
LRVLDPACGS ANFLYVTLEH LKRLEGEVLN QLSALGDTQD SLDLGRETVN LQQLRGIELN
ERAAALAELV LWIGYLQWHI RSFGNAGVAE PVVHDYGNIE HRDAVLDYDR VEPMTDEAGS
PIMRWDGVTT KTHPVTGQQV PDDAAQVVQW RYINPRQAQW PVVDFIVGNP PFIGAGAMRG
ALGEGYVDAL RGAWPKVPES ADFVMYWWHR AAEMVSAGQV QRFGFITTNS LRQTFNRRVV
QTALTDGLSL LFAVPDHPWV DSANGAAVRI AMTVAGAGQS DGKLLTVQSE QVSEHGEVQV
DMAQTVGLIH PDLRIGANVA ASVGMRSNMD LSNRGVQLFG AGFIVSPEEA AALGLGSVAG
LEKHVRQYRN GRDLTSTPRG AMVIDMFGLG VNDVRAKYPA AYQWLLERVK PERDQNNRAT
YRNNWWFFGE PRRVLRHQLN GLSRYIATVE TAKHRVFQFL DISVLPDNKL VAIALSDALQ
LGVLSSAAHV AWAVAAGSTL EDRPVYVKTT CFERFPFPGE DTGLTPQLTE RIRSLAEQLD
AHRKSRQAAH STVTITGLYN VLDKLRSGET LTAAERNLND NGLVGVLRSL HDELDAAVLS
AYGWGDLSLP ADTDALLLRL VELNTRRANE EAAGLVRWLR ADFQSGTGQG EQTSIEGATE
ADEDGDAVKP VAAKVAVAQK PWPSGLADQI KAVADILADS GTSLDLDGLA SRFSNKGRCR
ERIPIILDAL VAIGRARVQS DGRWIDSGFN
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