| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4217 |
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| Symbol | |
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| ID | 3961935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4692224 |
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| End bp | 4693213 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637919031 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_525435 |
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| Protein GI | 89902964 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.969787 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAATA GTTTATTGAA ACCCAAGGCC ATCAATGTCG AGCAAATGGG TGGCAATCGC
GCCAAAGTTG CTCTTGAGCC CTTTGAACGC GGATATGGTC ATACGCTCGG CAATGCATTG
CGCCGGGTCT TGCTGGCCTC AATGCCTGGT TATGCCGCCA CTGAAGTGAC CATTGCCGGC
GTCTTGCATG AGTATTCCTC TATTGACGGG GTGCAAGAAG ATGTCGTTAA TATTTTGTTG
AATCTCAAAG GTGTTGTGTT CAAGCTTCAC AACCGCGACG AGGTGACTCT GAGCCTGCGC
AAAGACGGAG AAGGACTGGT TACGGCCAGT GACATTCAGA CTCCCCATGA TGTCGAGATC
ATCAATCCTG ATCATGTGAT CGCACACTTG TCGCAAGGCG GCAAGCTGGA TATGCAAATC
AAGGTTGAAA AAGGCCGCGG CTATGTGCCC GGGACGATGC GTCGGCATGG GGATGAGCCC
ACCAAGTCTA TTGGACGTAT CATTTTGGAT GCCTCCTTTT CTCCCGTAAA GCGCGTCAGT
TATACGGTTG AGAGTGCGCG TGTTGAGCAG CGTACGGATC TCGACAAGCT AGTTGTCGAT
ATTGAAACCA ATGGTGCTAT TTCTGCTGAA GATGCGGTTC GTGCCTCTGC AAAGATTTTG
GTTGAGCAAT TGGCGGTGTT TGCACAGTTG GAGGGCAGTG AGTTAGCCGC GTTCGATACG
CCTTCACCCC GCGGTAGCAC GCAGTTTGAT CCCATTTTGC TGCGTCCGGT GGATGAGCTT
GAGCTCACGG TTCGTTCAGC GAACTGCTTG AAGGCCGAAA ATATTTACTA TATTGGCGAC
CTGATTCAAC GCACGGAAAA CGAGTTGTTG AAGACGCCAA ATCTGGGCCG CAAGTCGCTC
AATGAAATCA AGGAAGTGCT GGCTTCCCGC GGTCTGACTT TAGGCATGAA GCTTGAAAGT
TGGCCTCCAG CCGCTCTCGA AAAGCGTTAA
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| Protein sequence | MQNSLLKPKA INVEQMGGNR AKVALEPFER GYGHTLGNAL RRVLLASMPG YAATEVTIAG
VLHEYSSIDG VQEDVVNILL NLKGVVFKLH NRDEVTLSLR KDGEGLVTAS DIQTPHDVEI
INPDHVIAHL SQGGKLDMQI KVEKGRGYVP GTMRRHGDEP TKSIGRIILD ASFSPVKRVS
YTVESARVEQ RTDLDKLVVD IETNGAISAE DAVRASAKIL VEQLAVFAQL EGSELAAFDT
PSPRGSTQFD PILLRPVDEL ELTVRSANCL KAENIYYIGD LIQRTENELL KTPNLGRKSL
NEIKEVLASR GLTLGMKLES WPPAALEKR
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