| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4190 |
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| Symbol | |
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| ID | 3961907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4659495 |
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| End bp | 4660730 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637919004 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_525409 |
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| Protein GI | 89902938 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0166968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCAA CCGCTTCACC ACGCCCGCTA CCGCTCGCCG GCTTGCGCAT TCTTGCTGTC
GAACAGTACG GTGCCGGCCC GTTCGGCACA TCATACCTGG CGGATCTCGG CGCTGAAGTG
ATCAAGATAG AGAATCACAA GGAAGGCGGC GATATTGGCC GCTCGGTGGG CCCCCACTAT
TTTGGTCCTG GCGACAGCCA GTTCTTCCAG ACCTTCAACC GCAACAAGAA AAGCATAACG
CTCGATCTAA AGCACCCGAA GGGGATAGAG GCATTTCGGG CTCTGGTGAA GGAAGCTGAC
GCGGTCCTCG ACAACCTACG TGGCGATCAC CCTGAGAAGC TAGGCCTGAC CTACGCGGAT
CTGTGTGAGA TCAATCCGCG CATCATCTGC GCTCACCTAT CGGCATACGG GCGAGACGGT
TCCCGCAAGG CCTGGCCAGG CTATGACTAC CTGATGCAGG CCGAAGCGGG GCACATGTCG
CTCACCGGCG AGCCTGACGG GCCACCGACC CGCTACGGAC TTTCGATCGT CGACCTGATG
ACGGGGCTGG CGGCCTCATT CGCGCTACTA GCTGGCGTCG TAAGTGCCCG CGACACAGGT
GTCGGCATGG ATGTTGACAC CTCACTCTTC GACGTGGCAC TGCACAACTT GAACTATCCT
GGCACCTGGT TTCTTAACGG CGGCACCGTC ACCGGCCGTG GCGAACGCTC GACCCATCCG
AGCCTGACGC CGAGCCAGCT TTATCGATCG CAGGACGGCT GGGTATTCAT TATGTGCAAC
AAGGAAAAGT TCTGGACCAT CCTCGCTGAC GAACTCGGAC ATCCTGAATG GAAAGTGGAC
CCGGAACTCT GCAACTTCGC CGTGCGGCTC GCAAACCGCC CCCGCGTAAC GCAGTTGTTG
GATACTGCGT TTTCGCGCCG TCCCACCGAG GAGTGGATCC GCCTGCTCGC CGGCAAGGTG
CCAATCTCGC CGGTCTATGA CGTTGCCCAG GCGCTTTCGA CCCCCTTTGT GTCCGAGCGC
GACAGCGTGC TCGACTTTCG CTACGAAGAC GGCCACACAG CACGGATGAT TGCCAACCCG
ATACGCATCA ACGGCGTCGA TCTTCCCACC AACGCCGCTC CGGCAATGGG TGCGCACACT
TACAGTCTGC TGCATGAAGT TGGCTACAGC GATGAACAGA TCGCTGTGCT GCAGGCTGAA
GGCGCGATAG GCGAACTGCC CATGTATTCC GCGTGA
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| Protein sequence | MQATASPRPL PLAGLRILAV EQYGAGPFGT SYLADLGAEV IKIENHKEGG DIGRSVGPHY
FGPGDSQFFQ TFNRNKKSIT LDLKHPKGIE AFRALVKEAD AVLDNLRGDH PEKLGLTYAD
LCEINPRIIC AHLSAYGRDG SRKAWPGYDY LMQAEAGHMS LTGEPDGPPT RYGLSIVDLM
TGLAASFALL AGVVSARDTG VGMDVDTSLF DVALHNLNYP GTWFLNGGTV TGRGERSTHP
SLTPSQLYRS QDGWVFIMCN KEKFWTILAD ELGHPEWKVD PELCNFAVRL ANRPRVTQLL
DTAFSRRPTE EWIRLLAGKV PISPVYDVAQ ALSTPFVSER DSVLDFRYED GHTARMIANP
IRINGVDLPT NAAPAMGAHT YSLLHEVGYS DEQIAVLQAE GAIGELPMYS A
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