Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_4180 |
Symbol | |
ID | 3961897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 4650549 |
End bp | 4651067 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637918996 |
Product | MaoC-like dehydratase |
Protein accession | YP_525401 |
Protein GI | 89902930 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0213114 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTCAGG TCGTCAAGCA AGTCGGTGAG CATCGCTTTC GCGAGTCCTT TGGCCGCCAT TTCGAAGAGT TCAACATCGG CGACATCTAC GAGCACCGCC CGGGCCGCAC CGTCACCGAG ACCGACAACA CCTGGTTCAC CTTGCTCACG ATGAACACGC ACCCGATGCA CTTCGACGCC GAGTACGCCA AGGCTAGCGA GTTCAAGCGC TGCATCATCT GTAGTCCGTT CACGGTGGCG TTGATGGTGG GCATGAGCGT CACCGACGTG AGCCAGAAGG CCATCGCGAA TCTGGGCTGG ACCGACATCA AGCTCACGCA TCCGCTGTTC GCCGGCGACA CGCTGTATGC CGAGTCGGAG GTGACGGACA AGCGCGAGTC AAAATCGCGC CCCGGCGCTG GCCTGGTGAC CGTGAAGACC ACCGGCCTGA ACCAGGATGG CAAGGTCATT GGCACCTTTA GCCGCACCAT GCTGATCGCC AAGATCGGCC ACAGCATCGA AGACAAAGTC AATTACTGA
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Protein sequence | MVQVVKQVGE HRFRESFGRH FEEFNIGDIY EHRPGRTVTE TDNTWFTLLT MNTHPMHFDA EYAKASEFKR CIICSPFTVA LMVGMSVTDV SQKAIANLGW TDIKLTHPLF AGDTLYAESE VTDKRESKSR PGAGLVTVKT TGLNQDGKVI GTFSRTMLIA KIGHSIEDKV NY
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