| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4122 |
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| Symbol | |
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| ID | 3961820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4598872 |
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| End bp | 4600221 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637918946 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_525351 |
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| Protein GI | 89902880 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGTGC CACAACCGTC ACCGCTGCAC CATTTGCCCG TCGGAGCCCT CGAAGGCATG
GACGAGGCGA CCTGGCTGGA CGTCATTCAC AAGATGGACG AGGTCTATTC CAAGCTGGTG
ACCGATGAGA TCGAGCTGGA GGAAAAGAAC GCGCAGCTTG AACAGTCGCA GCAATTCATC
TTCAGCCTGC TGTCGGCCAT GAGCGATGTG CTGATCGCCT GCAATCAGAA CGGCATGATC
GAAGAAACCA ACGCGGCTTT GTGCGAACTG GTGGGTCTGA GCGAGCAGGC GCTGCGCGGC
ACGCCGGTGC TCGGCTTGCT GGCCGACGAA CAAAGTGTGC AGCGCTGGCA GTTGGCGATG
TACCAATCGG CCTCGCATGA CGCTGCGGTG GTGGAGATCA ATCTGCGCAG CGCCAGTGGT
GAAGTGGTCG CGGTGGACTT CAATTGCACC CCCCGGCACA ACAGCGCCGG TCGCCAGGTC
GGCCGGGTGC TGGTGGGACG CCCCCTGGGC GAGCTCAAAC GCGCCTACCA GCAGTTGCGC
CAGGCGCACG AGGCCTTGAA AAATGCGCAG GCGCAACTGC TGCATTCGGA AAAGATGGCC
TCGCTGGGGC GGCTGGTGGC TGGCGTGGCG CACGAGCTCA ACAACCCGAT CAGTTTTGTG
CTGGGCAATG TGCATGTGCT GCAACGCTAC GGCGCACGCC TGAGCCGCTA CCTGCAGGCG
CTGCACCAGC TTGACCTGCC CGCGCCGGTG CAGGCGCTGC GCGCTGAGCT GCGTATCGAC
CACTTGGTGG GCGACCTGCC TTCGCTGATG GCGGGCACGT TAGAGGGCGC CCAGCGCACC
ACCGACATCG TCAACGGCCT CAAGCGCTTT GCCACCGCGG CGCACGAGGA CGTGACGCAG
GTGGAACTCA ACGCGGTGGT GGAGCGCGCC ATGCTGTGGG TCAAAAAAGG CACGTCGCCC
CGGTTCGAGA TGGTCTGGAC GCGTGGCCCC GATTGTTTTG TCACCGGCAA CGCCGGGCAG
TTGCTGCAGG TGGTGATGAA CCTGATCCAG AACGCTTCGG ACGCCGCCAG CACAGACGAC
GCCACTGCGC CGCAATTGCG CATCAGCCTG CAGCAAGATG GCGGGCAAGT GCGTCTGCGC
TTTGCCGACA ACGGCCCAGG CATTGCACCT GAACATTTGT CGCGCGTCTT TGATCCGTTT
TTTACCACCA AGAGCGTGGG CAAAGGCACC GGTCTGGGTC TGTCGATCAG CTACGGCCTG
GTTGAGCAAC ACGGCGGGCA GCTCAGCGCC GCCAACCTGC CGCAAGGAGG CGCGGTGTTT
ACGCTGACAT TGCCGATGCC AAAGGCATAA
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| Protein sequence | MPVPQPSPLH HLPVGALEGM DEATWLDVIH KMDEVYSKLV TDEIELEEKN AQLEQSQQFI
FSLLSAMSDV LIACNQNGMI EETNAALCEL VGLSEQALRG TPVLGLLADE QSVQRWQLAM
YQSASHDAAV VEINLRSASG EVVAVDFNCT PRHNSAGRQV GRVLVGRPLG ELKRAYQQLR
QAHEALKNAQ AQLLHSEKMA SLGRLVAGVA HELNNPISFV LGNVHVLQRY GARLSRYLQA
LHQLDLPAPV QALRAELRID HLVGDLPSLM AGTLEGAQRT TDIVNGLKRF ATAAHEDVTQ
VELNAVVERA MLWVKKGTSP RFEMVWTRGP DCFVTGNAGQ LLQVVMNLIQ NASDAASTDD
ATAPQLRISL QQDGGQVRLR FADNGPGIAP EHLSRVFDPF FTTKSVGKGT GLGLSISYGL
VEQHGGQLSA ANLPQGGAVF TLTLPMPKA
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