Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_4066 |
Symbol | |
ID | 3961745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 4533706 |
End bp | 4534524 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637918890 |
Product | ABC transporter related |
Protein accession | YP_525295 |
Protein GI | 89902824 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.982341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAGC CCGGCACGGA CCACGTCCTC GAAGTCAACA ACATCGAGGT CATCTACAAC AAGGTGGTGC AGGCCCTGCG CGGCCTCTCC CTGGTCGTGC CGCGCGGCCA GATTGTGGCC CTGCTGGGCA GCAACGGGGC CGGCAAGTCG ACCACGCTGA AGGCGATTTC AGGTCTGCTG GCACTCGAAG ATGGCGAACT CAAGAGCGGC AGCATCTCGT TCAATGGTCA GTCCACCGCA CGGCTGGCGC CGCAACAACT GGTGCGCCAG GGTCTGAGCC ATGTGATGGA GGGGCGCCGC ATCTTCGAGG ACCTCACGGT CGAAGAAAAC CTGGTCACCG CCAGCTACGC CCTCACCGGT CGCGGCGGCG TGAAACCCGA CTTTGATCTG GTCTACAGCT ACTTCCCGCG CCTGCACGAG CGCTGCAAAG GGCTGGCCGG TTACCTCTCG GGCGGCGAGC AGCAGATGCT GGCCATTGGC CGCGCGCTGC TCGCCCAGCC GCAGTTGATC CTGCTGGACG AGCCCTCGCT GGGTCTGTCG CCCAAGCTGG TGGAAGACAT TTTCACCATC ATCGCGCGCA TCAATGCCGA GCGCGGCGTC TCCATGCTGC TGGTGGAGCA AAACGCCACC CTGGCCCTGG CCGTGGCGCA CAGTGGCTAC ATCATGGAAA ACGGCAAGAT CGTCATCGAC GGCAGCGCCG AGCGGCTGGC CGGCGACCCC GACGTGCGCG AGTTCTACCT CGGCGTCGGC GGCAGCGGCG AGGCGCGCAG CTTTCGCGAC ATCAAGCATT ACAAGCGCCG CAAGCGCTGG CTGTCCTGA
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Protein sequence | MTQPGTDHVL EVNNIEVIYN KVVQALRGLS LVVPRGQIVA LLGSNGAGKS TTLKAISGLL ALEDGELKSG SISFNGQSTA RLAPQQLVRQ GLSHVMEGRR IFEDLTVEEN LVTASYALTG RGGVKPDFDL VYSYFPRLHE RCKGLAGYLS GGEQQMLAIG RALLAQPQLI LLDEPSLGLS PKLVEDIFTI IARINAERGV SMLLVEQNAT LALAVAHSGY IMENGKIVID GSAERLAGDP DVREFYLGVG GSGEARSFRD IKHYKRRKRW LS
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