Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_4064 |
Symbol | |
ID | 3961743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 4531423 |
End bp | 4532460 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637918888 |
Product | inner-membrane translocator |
Protein accession | YP_525293 |
Protein GI | 89902822 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCATCG GAACCCTCAA GGAGACCTAC ATCGCCGACG CGGCGCTGTT TGACTCACGC ACCCAGCAAA CGTGGCTGGT ATTGGGCGCC GCCCTGTTGC TGCTGTTCCC CTTCATGGCC AGTGACTACT GGCTGTACCT GGCCTGCCTG GTCAGCATCA ATGTGGCAAG CGCCACCGGG CTGAACATCC TCACCGGCTA CACCGGTCTG GTGAGCCTGG GCCAGGCCGC CTTCATGGGG CTGGGCGCCT ACACCGTGGC CATCCTGGAA ATCCGCGTCG GCTCGCCGTT CCTGCTCAAC CTGCTCGCGG GCGGCTTCGT CGCCATGGCG GGCGGTCTTG TCGTGGGTAT CCCGTCGCTG CGTGTGAAAG GCCTGTACCT GGCCATCGCC ACCATCGCCG CCTCGTTCAT CGCGCATTTC CTGTTTGCAA ACACCGCCTT CACGGGTCGT ACCGCGGGTC TCACACTGCC CCCGGCCAGC CTGTTTGGCG TGGTGCTCGA CACCTCGTTT CGCCTCTACT GGATCATCGT GCCGGTCACG CTGCTGATGC TGCTGGGCGC GGCCAACCTG TTTCGCACCC GCGTGGGACG CGCCTTCATT GCGATCCGTG ACCGCGACAT TTCGGCCGAA GTGCTGGGTA TTGCCCTGTT GCGCTACAAG CTGCTGTCGT TCGGCCTGTC ATCGTTCTAT GCGGGCGTGG CCGGTGGCTT GTGGGCCTAC TTCTTCCGCG TCGTCACGCC CGAGAGCTTT CCGCTGTCGA TGTCCATTTT CTTTCTGGCG GCCATCATCG TCGGCGGCAT GGGCTCCATT CTGGGGGGCA TCCTGGGCGC CATCTTCATG ACCATGGTGC CGGAGCTGCT CAAGCTGGCC GTGGGCCTGT TGCCCGGCGG CAGCGAACTG ACTGTCTTCC TGTCGCCCGT ACGCACCGTC GTGTTCGGGT TATTGATCAT TGGATTTCTG GTGTTCGAGC CGCATGGGCT CGCAGAAGTG TGGCGGCGCA TTCGCCGCTT TTTTCACCTG TGGCCGTTCC GCAACTGA
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Protein sequence | MRIGTLKETY IADAALFDSR TQQTWLVLGA ALLLLFPFMA SDYWLYLACL VSINVASATG LNILTGYTGL VSLGQAAFMG LGAYTVAILE IRVGSPFLLN LLAGGFVAMA GGLVVGIPSL RVKGLYLAIA TIAASFIAHF LFANTAFTGR TAGLTLPPAS LFGVVLDTSF RLYWIIVPVT LLMLLGAANL FRTRVGRAFI AIRDRDISAE VLGIALLRYK LLSFGLSSFY AGVAGGLWAY FFRVVTPESF PLSMSIFFLA AIIVGGMGSI LGGILGAIFM TMVPELLKLA VGLLPGGSEL TVFLSPVRTV VFGLLIIGFL VFEPHGLAEV WRRIRRFFHL WPFRN
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