| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4058 |
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| Symbol | |
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| ID | 3961737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4524662 |
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| End bp | 4526698 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637918882 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_525287 |
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| Protein GI | 89902816 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCCAG CCCTGCAACG CGCCGCCGCC TTCGCCACCG GGCAGTTTCA CCGTCTGCTG
GGGGCCACCA GGCGGCATCC TGTGCGGGCC GCTTTGCTGC TGCCGGCGCT GCTGCTGCTT
TACGTGCTGG TGCTGATTCC ATTCACGCCC GGCATCGGTG ACCTGCGCAA AGCCAAGGCT
GAAGCACCCT CCGTGCTGCT GGCTCAAGAC GGCACGGTGC TGGCCGAGTA CAGGCGCATC
AACCGCCAGT GGGTGACTTT GGACGAGATT GCGCCGAGCG TGGTGGACGC GTTGATCGCC
ACCGAAGACC GCCGGTTTTA CCAGCACCAC GGGATTGACT TTCGCCGCCT GGCAGGCGCC
GCTCTGAGCA CTTTGGGCGG TGATTTGCAG GGGGGCTCGA CCATCACGCA GCAGCTGGCG
CGCAATCTTT ACCCCGAAGA AATCGGTCGC GCCAACAGCA TTACCCGCAA GATCAAGGAG
GCCATCACCG CGCTGAAGAT CGAGGCGGTG TATTCCAAGC GCGAGATTCT GGAGACCTAC
CTCAACACCG TGCCTTTTCT GTACAACGCC TTTGGCATCG AGATGGCCGC GCGGACCTAT
TTTGGCAAGT CCGCCGACAA GCTCGACGTG CTGGAGAGCG CAACGCTGAT CGGCATGCTC
AAGGGGACGA GCTACTACAA CCCGGTGCAG AACCCGCAGC GCGCGCTGCA GCGCCGTAAC
CTGGTGCTGG AGCAGATGGC CAAAGACGGC AAGCTGGCCC CGGCCCGGCT TGCAGCGTTG
TCCAAACGGC CGCTCAAACT CGATTTTGAG CGGCAAGAGG AGTCGCTGGG ACCGGCGCCG
CATGTGGCCC AGCACTTGCG AAAATGGCTG ATCGACTGGG CCGACCGCAG GGGCTATAAC
ATCGATGCCG ACGGCCTGCG GGTGCACACC ACCCTGGACG CCAAGTTGCA GAAGGTGGCC
AACCAGGCGG TGGCGCGGCA GTTGGCAAGC CTGCAAAAGC TGGCGGACGG GCGGCGCAAG
ACCGGGCAGG AGCGCGCGGT TCTGCAGGCC GGCTTTCTGG CGCTGGACCC GCGCGATGGC
GCCGTGCGGG CCTGGGTGGG CAGCCGCGAC TATGCGCAGG AGCAGTTTGA CCATGTGAGC
CAGGCGCGGC GCCAGCCGGG CTCGACCTTC AAGCCTTTTG TGTATGGCGC GGCGTTCATG
CAGGGTTTCG ACCCGTCCTA CACCTTGATT GATCAGCCGG TAGCGATCTC GTCGCCGGGC
AGCGAGGTAT GGACACCCAG CGATGCAACG CCACCCAGTG GTCTGCCCAT CAGCCTGCGC
GACGGGTTGG TGTATTCCAA AAACACCATC ACCGCCCAGC TGATGCAACA AGTGGGGCCG
GCCCGCGTCG GGCAGCTGGC GCGGGCCATG GGGGTGCGCC AGAGCAAGCT GGACTTGGTG
CCCTCGCTCG CCCTGGGCAC CAGCCCCGTC ACGCTGATCG AGATGGTGGC AGCTTACGGC
ACCATTGCCA ATGGCGGCAA CTACCTGCAG CCGTTTTTGG TGCTGCGCGT GGAAGACCGC
AACGGGCAGT TGCTGGAGCA GTTCGATCCC GTCAGGGAGC CCGGGCCAGC CATGCCACGC
GCGCAGGCGC TGACCCTGGT GAACGTGATG CGCGGCGTGA TTGACGAGGG CACGGGCGCC
GCCATTCGCC ACCGTTACGG CATCCAGGCC GACCTGGCCG GCAAGACCGG CACCACACAA
GACAACACCG ATGGCTGGTT CATCATGATG AATCCGCAAC TGGTGGCGGG CGCCCGGGTC
GGCTTTAACG ACAACAGCGT GACGATGGGG TCCTGGGGCC AGGGCGCCCG CAGCGCGCTG
CCCATGGTGG GGGAGGTGTT TCAGCAGGCT TTTCGCAACC GCTGGCTTGA CCCGAAGGTT
GAATTCGACA TTCCGCGCCC GCGGCCACCA CCGCCCCCGG AGCCGGCGGA CAATCCGTTG
AAAGGAATCG TGGACGATGT GCTGGGCGGG CTCTTGCGTC GGCTGCGCGG GGAGTGA
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| Protein sequence | MTPALQRAAA FATGQFHRLL GATRRHPVRA ALLLPALLLL YVLVLIPFTP GIGDLRKAKA
EAPSVLLAQD GTVLAEYRRI NRQWVTLDEI APSVVDALIA TEDRRFYQHH GIDFRRLAGA
ALSTLGGDLQ GGSTITQQLA RNLYPEEIGR ANSITRKIKE AITALKIEAV YSKREILETY
LNTVPFLYNA FGIEMAARTY FGKSADKLDV LESATLIGML KGTSYYNPVQ NPQRALQRRN
LVLEQMAKDG KLAPARLAAL SKRPLKLDFE RQEESLGPAP HVAQHLRKWL IDWADRRGYN
IDADGLRVHT TLDAKLQKVA NQAVARQLAS LQKLADGRRK TGQERAVLQA GFLALDPRDG
AVRAWVGSRD YAQEQFDHVS QARRQPGSTF KPFVYGAAFM QGFDPSYTLI DQPVAISSPG
SEVWTPSDAT PPSGLPISLR DGLVYSKNTI TAQLMQQVGP ARVGQLARAM GVRQSKLDLV
PSLALGTSPV TLIEMVAAYG TIANGGNYLQ PFLVLRVEDR NGQLLEQFDP VREPGPAMPR
AQALTLVNVM RGVIDEGTGA AIRHRYGIQA DLAGKTGTTQ DNTDGWFIMM NPQLVAGARV
GFNDNSVTMG SWGQGARSAL PMVGEVFQQA FRNRWLDPKV EFDIPRPRPP PPPEPADNPL
KGIVDDVLGG LLRRLRGE
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