| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4005 |
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| Symbol | |
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| ID | 3961684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4466630 |
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| End bp | 4468462 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637918829 |
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| Product | hypothetical protein |
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| Protein accession | YP_525234 |
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| Protein GI | 89902763 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.467683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACCC TCATACCGGC GCTTGGCGCT TGCGTGTCGC GCATGACAGG CGGCGAGCGA
CGCTTGGCCG AGCGGCTGGA ACAAAAGCTC GACGACGACT ACCTGCTCTG GTACGACGTG
CCGATGGGCC CGAAGAACGC CCACCCCGAC TTTTGCGTGA TGCACCCGCG CCGGGGCATT
CTGGTGCTGG AGGTGAAAGA CTGGAAGCCC AGCACCATCC AGCAGGCCGA CAAACAGACC
TGGACCATCA TCCCCGACGG CATTCCAAAA AACGTCATCA ACCCGCTGGA GCAAGCCCGC
CAATACGCGC ATCAGGTTGT CAATGCGCTG GAGCGCGACC CGCAACTGGT GCAGGCGGAT
GGCCCCCACG CCGGCAAGCT GGCCTTCCCC TGGAGCTATG GCGTGGTGTT GACCAACATC
ACCCGCAAGC AGTTTGAAGC CGCAGAACTG CAGCACGCCA TCGAGCCGCA CCGCGTGCTG
TGCCAGGACG AAATGCTGGA GAGCGTGGGC GCCGAAGAAC TGCAAAGCCG CCTGTGGGAC
ATGTTCCCCT ACATGATGCG TGGCGTGATG AGCCTGCCGC AACTGGACCG CGTGCGCTGG
ATCATGTTTC CGCAGGTGCG GGTGCCACAC GGGTCAACTG GGCAAACCGC GCTGTTTGAC
GACACCGACG CGGATGCGGA TGCGGATGCG GAGATGCCCA GCATCATGCG CGTGATGGAC
ATTCAGCAAG AGCAACTGGC GCGCAGCCTG GGCGATGGCC ACCGTGTCAT CCACGGCGTG
GCGGGCTCGG GCAAGACCAT GATTCTGGGC TACCGCGCCG AGTATCTGGC GCAGGCCAGA
ACCGCCAGCA GCAAGCCCAT TCTCATCCTG TGTTTTAACG AGCCGCTGGG CGTGAAGCTG
CACAGCGTGA TGGACGCCAA GGGCTTGAGC GACAAGGTGC ATGTGCGGCA TTTTCATAAA
TGGTGCTATG ACCAGCTCAA ATACTCGGGA CAGGCTATGC CACCCCAAGG CCCTAAGTTC
TCGGAAGAAC TGGTTGACCG TGTCATCCGC GCCGTAGACC GCAAGCAAAT CCCCAGCGGC
CAGTACCAGG CCGTGCTGAT CGACGAAGGC CACGACTTCG CGCCCGAGTG GCTCAAACTG
GTCACGCAAA TGGTGGACCC CACCACCAAC AGCCTGCTAC TGCTGTACGA CGATGCGCAA
AGCATTTATG AGCGTGCGCG CAGCAAGCAG TTCAGTTTCA AAAGCGTGGG CGTGCAAGCG
CAGGGCCGCA CCACCATTTT GAAAATCAAC TACCGCAACA CCAAGCAGAT TCTGCAAACC
GCCAACCTCA TTGCCGCCGA TTTGCTGACT GCGGACGACC GGGACGATGA CGGCATACCA
CTGGTGAAAC CCATCAGCTG CGGGCGCGAA GGGCAGGCGC CCATCCTCAT CAAACTGCCC
AGTTTGCGCG AAGAAGCATT CGCCATTGCC GACCAACTCA GCCACGCGCA CAAGGACGGC
CACGCTTGGG GCGACATGGC CATCCTGTGC GCGGACTGGA AGACCATGGA CCTGTGCGCC
GACGCCCTGC ACCAGCGCAA GCTGCCGTTC AATGTGCGCA AGCGCACCGG CGAGTACAAC
CCCGCAGCCG ACGCCATCCA GATCATGACC ATGAAGGTGA GCAAAGGCCT GGAGTTCCCC
GTGGTGGCGC TGCCCGGCGT GGGGCACATG CCTGCGAAGG GCGAAGACGA GCAGGAAGCC
GCGCGGGTGT TTTATGTGGC GGCGACGCGG GCGACGCAGA GGTTGGTGAT TGGGGTGGGT
GGGGATGGGG GGTTTGGGGT GAGATTGACC TGA
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| Protein sequence | MATLIPALGA CVSRMTGGER RLAERLEQKL DDDYLLWYDV PMGPKNAHPD FCVMHPRRGI
LVLEVKDWKP STIQQADKQT WTIIPDGIPK NVINPLEQAR QYAHQVVNAL ERDPQLVQAD
GPHAGKLAFP WSYGVVLTNI TRKQFEAAEL QHAIEPHRVL CQDEMLESVG AEELQSRLWD
MFPYMMRGVM SLPQLDRVRW IMFPQVRVPH GSTGQTALFD DTDADADADA EMPSIMRVMD
IQQEQLARSL GDGHRVIHGV AGSGKTMILG YRAEYLAQAR TASSKPILIL CFNEPLGVKL
HSVMDAKGLS DKVHVRHFHK WCYDQLKYSG QAMPPQGPKF SEELVDRVIR AVDRKQIPSG
QYQAVLIDEG HDFAPEWLKL VTQMVDPTTN SLLLLYDDAQ SIYERARSKQ FSFKSVGVQA
QGRTTILKIN YRNTKQILQT ANLIAADLLT ADDRDDDGIP LVKPISCGRE GQAPILIKLP
SLREEAFAIA DQLSHAHKDG HAWGDMAILC ADWKTMDLCA DALHQRKLPF NVRKRTGEYN
PAADAIQIMT MKVSKGLEFP VVALPGVGHM PAKGEDEQEA ARVFYVAATR ATQRLVIGVG
GDGGFGVRLT
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