| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3974 |
|---|
| Symbol | |
|---|
| ID | 3961634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 4440142 |
|---|
| End bp | 4441275 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637918798 |
|---|
| Product | 3-oxoacyl-(acyl carrier protein) synthase III |
|---|
| Protein accession | YP_525203 |
|---|
| Protein GI | 89902732 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTGTG ATGTTTTCCT GACGCGCACA GCGTCGTATT TGCCACTGTT GCCCGTGGGC
AATGACGAGA TGGAGTCGGT GCTCGGCATG GTCGGCGGGC GTCCTTCCCG GGCACGTCGC
ATTGTGTTGC GTAACAACGG CATCCAGAGT CGTCACTATG CGCTGGACCC TACCACCGGC
GAGCCGGTTA TGACCAATGC CGAACTGGCG GCGCATGCTG TCCGCGCATT GGGTGACCTC
GGCCCTGTGG ATTGCCTGGC TGCCGCCACC TCGCGACCTG ATCAATTGAT GCCATCGCAT
GGGGTCATGG TGCATGGCGC TTTGGGTTGG CCTCGCCTGG AAGTGGTCTC GTTGGCTGGC
ATCTGCCTGG CCGGGGCTGC TGCCTTCAAA TATGCCTGGC TGTCAGTGCG TGCGGGAGAC
GCGCAGCGTG CAGTTGCCGT GGCTTCCGAA ATGGCCTCGC TGGCATTGCG TGCCCGCAAC
TTTGACGCTG AACTTGATCA CAAAGTGAAT GAGTTGGAAG CACGCCCCGA AATCGCTTTC
GAGAAAGATT TCTTGCGCTG GATGCTGTCT GACGGTGCGG GCGCTGTGCT GCTGGAAAAT
AAACCCAACG GCGCGCTGAG CCTGAAAGTG CAGTGGGTGG AACTCTCCTC CGCTGCCCAT
GAACTGCCAC CTTGCATGTA TTCCGGGGCG GAAAAGAACG CCGATGATTC CTTGACCGGT
TGGCAGTTAT TCTCAAGTCA GGAATGCGCC GCGCGCTCAG TGTTCACGGT AAAGCAGGAT
GTGAAACTGC TTAATGAACA TGTCGTGCGC GCCACACTCA CCGAGCCCCT GCGGGAGTTG
GTGAAGAAAC ACAACCTGGC GGGACAGCAG ATCGACTGGT TCTTGCCACA CTTCTCGTCC
AATTACTTTG CTGACCCTGC TGCTGATGGC GTTGCAGAAG CCGGTTTGAA CATCCCGCGC
GAGAACTGGT TTACCAATCT AGTGCAAAAG GGCAACACAG GCTCTGCTTC TCCCTTCATC
ATGCTTGACG AACTGTTTCA GTCTGGTCGC ATCCAGAAAG GGCACAAATT GTTGATGTTC
GTCCCTGAAA GCGGTCGATT CTCCAGCGGC TTCATCTTCT TGGAAGCCGT CTGA
|
|---|
| Protein sequence | MSCDVFLTRT ASYLPLLPVG NDEMESVLGM VGGRPSRARR IVLRNNGIQS RHYALDPTTG
EPVMTNAELA AHAVRALGDL GPVDCLAAAT SRPDQLMPSH GVMVHGALGW PRLEVVSLAG
ICLAGAAAFK YAWLSVRAGD AQRAVAVASE MASLALRARN FDAELDHKVN ELEARPEIAF
EKDFLRWMLS DGAGAVLLEN KPNGALSLKV QWVELSSAAH ELPPCMYSGA EKNADDSLTG
WQLFSSQECA ARSVFTVKQD VKLLNEHVVR ATLTEPLREL VKKHNLAGQQ IDWFLPHFSS
NYFADPAADG VAEAGLNIPR ENWFTNLVQK GNTGSASPFI MLDELFQSGR IQKGHKLLMF
VPESGRFSSG FIFLEAV
|
|---|
| |