| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3942 |
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| Symbol | |
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| ID | 3961582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4407629 |
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| End bp | 4410352 |
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| Gene Length | 2724 bp |
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| Protein Length | 907 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637918767 |
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| Product | serine/threonine protein kinase with Chase2 sensor |
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| Protein accession | YP_525172 |
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| Protein GI | 89902701 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG4252] Predicted transmembrane sensor domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGAAAT CTTCTTTATC TGAATCGGGT TCTTTCTGGC GCACCGACGG GTTTGTGGGT
GTCTTGGTTG TGCTCATTGT GGTGCTGCTG TACCTGGGCA GCGACTTTAT TGGCACCTTG
GAACGGCGGT TTTATGACGT CGCCAGCACC AACACCAGCA GCTCGCGCCA TCCGTCCGAC
CGGATCGCCG TCATCGCCAT TGATGATCGG AGTATTGCCA ACATCGGTCG CTGGCCCTGG
CCACGTGGTA TTCATGCCCA GTTGATTGAC AAGTTGGCGA CCGCCAAATC CAAGGTCGTG
GTTTATGCCG TGTTCTTTTT TGAACCCCAG GTTGACCGGG GTCTGAGCTA CATTCGCAAA
ATGAAAGAGG TGCTGGGCGC CGACGCCGAT CCAGCCGGCA CCCCCTCCGC TCGGAGTGAA
CAGCTGGCGC GGGTGATGAC CGAAGCCGAG ACAGCACTCG ACACCGATGG TCAACTGGCG
GCGAGTCTCA AAAGCGCCGG CAACGTCATC CTGGCTTCGT CTTTCACCTT GGGCGAACCC
CAAGGCAACG CCGACCAGCC CCTGCCCGCG TTTGCGCTCA AGAGTGCGCT CGATGAAAAC
AGCGCTTTCT CGCTGCCAGC GCTCAGAGGG CAGCAGCCCA TCGAGCGCCT GGGGGCGGCC
GCAGCCGGTA TCGGTCACCT GAACCAGACG CAGGACGTGG ACGGCGCCGT TCGATTTGAG
CCCCTGCTGG TCAATTACGA CGGCAAGGCG GTGCCCTCGG TGGCGCTACT GGCCGCCACC
CAAAGTCTTA ACCTGAGCAC CGCTGATATC GCGCTCCATG AGGGTGAATC AGTGCAAATC
GGCCAACTGC GCGTAAAAAC CGATGCGGCG GCGCGCATGT TGCCCCAGTT CTATCAAGCG
CGTGACGGCA AACCGGCCTT TAGCGTGGAT TCTTTTGACG ATGTGCTCAG CGGCAAAATC
CTTGCCTCCA AATATGCAGA CAAGATTGTC ATCATTGGGG TCACGGCAAC GGGCGTGGGT
ACCCAGTTCC CTGTGCCTGG CAACCCGGCC TTGTCGCCCG CAGAAGCGAT TGCGCATGTG
ACGTCGAGCA TCTTGGGCGA GCACTTTATT GTTCAGCCAG GCTGGGGTGC CGGGGCCAGG
CTGGCGCTGT TGCTCCTGGC CAGCGCCTAT CTCATTGCCG CCTTGCCACG CTTGCCGGCG
GGTCGGGCAG CCGTGATCAC CCTGCTGTTA TTGACGGTTT TACTGGGCAC CGAGTTTGGC
CTGTTGTCGG GCGCGGCGCT GTGGCTGAAG CTGGTGTTTC CGGCGACGCT GCTGCTGATC
GGGCATCTGG CCCTGACGAC CAAGCGATTC TTGATGCCGC AGGCCGACAA GTCCAAGCCG
GATGAAGAGT CGGCTGAAAC CAAGCGCATG ATGGGCTTGG CGCTGCAGGG GCAGGGCCAG
CTCGACATGG CCTTTGACCG GTTCCGCCGC GTGCCCATGA CAGAGGCGGT GATGGGTGAT
TTGTGCCGCC TGGCACTTGA CTTCGAAGGC AAGTGCCAAT CGGACAAGGC CGGGGCGGTG
TATCAATACA TGGCGACCTA CAGCAAGGAC TACAAAGATA TCAAACTGAA GTTGAACCAG
GCCGGGAATC CGTCAGAAGC CGTGCTGATC GGTGGCAGCA TTTCCCGTCC GGGGGGCGCC
CTGCGGTTCG ACGCTGGCGC GATTGAGAAG CCCATGCTGG GGCGTTACCA AGTGGAAAAA
GAACTTGGCA AAGGCGCGAT GGGTGTGGTG TATTTGGGTA GAGACCCGAA AATTGGCCGG
GTGGTGGCGA TCAAGACCCT GGCGCTGAGT AAGGAATTTG AAGGTGATGA ACTGGTGGAT
GCGAGGGAAC GCTTTTTCCG CGAAGCCGAA ACGGCCGGGC GTTTACAGCA CCAGAATATC
GTGACGATTT TTGACGCTGG CGAGGAGCAC GATCTGGCCT ATATTGCCAT GGAGTTCCTC
AAGGGCAAGG ACTTGGCCGA CTACTGCCAG GGGGGTCGTT TGCTGGCAGT ACCCACCGTG
CTTTCCATCG TGGTGCGGGT GGCGCAGGCG CTGGACTATG CCCACCACCA GCATGTGGTG
CACCGCGACA TCAAGCCGGC CAACATCATG TACGAGCTCG AGAGCGACAC CTTGAAGGTG
ACTGACTTTG GAATTGCGCG CATCACCGAT TCGAGCAAAA CCAGGACCGG CCTGGTGTGG
GGTACTCCCA GTTTCATGTC GCCCGAGCAA CTCGCCGGTA AAAAAGTGGA TGGTCGATCG
GATCTCTATT CGCTCGGTGT CATGCTGTTC CAGCTGTTGA CAGGCGTGCT GCCCTTCCGT
GGTGACTCCA TGGCCGAGTT GATGTCCAAA ATTGCGAATG ATGAGGCGCG CGACATTTGC
AGCATCCGCC CGGCGTTGCC AGCGGCGCTG GCGCGCGTGG TCGCGGTGTC ACTGAGCAAA
CGCCCAGAGG CCCGCTACCA GGATGGGGCT CAGTTTGCCT TTGAGCTGCG GGCGGTATTA
TCGGCACTGA TGGGTGACGT GGCGGCGCTT GGCGGTGCCG TACCGACGGC AGACCGGCAG
GCGTCATCCG TGGCTGAAAA AACGGCGCAG TTTGTGGCAA CCGTTCCTGC ATCGGCGACA
GAATTTGAAA AAACGGTCGT GCTCGCCAGC ACAACCTCCA CGTTGAAACC GCCCAGCGCC
AAAGCAGGCG GCCTTGACAC CTAG
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| Protein sequence | MAKSSLSESG SFWRTDGFVG VLVVLIVVLL YLGSDFIGTL ERRFYDVAST NTSSSRHPSD
RIAVIAIDDR SIANIGRWPW PRGIHAQLID KLATAKSKVV VYAVFFFEPQ VDRGLSYIRK
MKEVLGADAD PAGTPSARSE QLARVMTEAE TALDTDGQLA ASLKSAGNVI LASSFTLGEP
QGNADQPLPA FALKSALDEN SAFSLPALRG QQPIERLGAA AAGIGHLNQT QDVDGAVRFE
PLLVNYDGKA VPSVALLAAT QSLNLSTADI ALHEGESVQI GQLRVKTDAA ARMLPQFYQA
RDGKPAFSVD SFDDVLSGKI LASKYADKIV IIGVTATGVG TQFPVPGNPA LSPAEAIAHV
TSSILGEHFI VQPGWGAGAR LALLLLASAY LIAALPRLPA GRAAVITLLL LTVLLGTEFG
LLSGAALWLK LVFPATLLLI GHLALTTKRF LMPQADKSKP DEESAETKRM MGLALQGQGQ
LDMAFDRFRR VPMTEAVMGD LCRLALDFEG KCQSDKAGAV YQYMATYSKD YKDIKLKLNQ
AGNPSEAVLI GGSISRPGGA LRFDAGAIEK PMLGRYQVEK ELGKGAMGVV YLGRDPKIGR
VVAIKTLALS KEFEGDELVD ARERFFREAE TAGRLQHQNI VTIFDAGEEH DLAYIAMEFL
KGKDLADYCQ GGRLLAVPTV LSIVVRVAQA LDYAHHQHVV HRDIKPANIM YELESDTLKV
TDFGIARITD SSKTRTGLVW GTPSFMSPEQ LAGKKVDGRS DLYSLGVMLF QLLTGVLPFR
GDSMAELMSK IANDEARDIC SIRPALPAAL ARVVAVSLSK RPEARYQDGA QFAFELRAVL
SALMGDVAAL GGAVPTADRQ ASSVAEKTAQ FVATVPASAT EFEKTVVLAS TTSTLKPPSA
KAGGLDT
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