| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3926 |
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| Symbol | gatB |
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| ID | 3961566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4384796 |
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| End bp | 4386286 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637918751 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_525156 |
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| Protein GI | 89902685 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACGT TTGTTGAAAA AGCGCCGTCA GCCTCGCGGG CTGCCCTCCC ATCCCCACTG
GTGCTGGGTT ACGAAGTCGT GATTGGCTTC GAGACCCACG CCCAGTTGTC CACCCAATCC
AAAATCTTCA GCCGTGCCGC CACCGCTTTC GGCGCCGAGC CCAACACGCA AGCCTGCGCG
GTGGACCTGG CGCTGCCGGG CACCTTGCCG GTGATGAACA GGGGCGCGGT CGAGCGGGCC
ATTCAGTTTG CGCTGGCGAT TGGCGCCCAG GTGTCACCAC GCAGCATTTT TGCGCGCAAG
AATTATTTTT ATCCCGACCT GCCCAAGGGC TACCAGATCA GCCAGTTTGA AATTCCGGTG
GTGGTCGGTG GTGAGGTCGA GTTCTACCTG GACGGCGAAA AACGTTCGGT GCGGCTGGTC
CGCGCCCACC TGGAAGAAGA CGCCGGCAAG TCACTGCACG AAGACTATGT GGGCCAAACC
GGCATCGACC TGAACCGCGC CGGCACGCCG CTGCTGGAGA TCGTGACCGA ACCCGACATG
CGCTCCAGCT TGGAAGCGGT AGCCTACGCC AAGGAGCTGC ACAAGATCGT GACCTGGATT
GGTATTTGCG ACGGCAACAT GCAGGAAGGC AGTTTCCGCT GCGACGCCAA TGTGTCGGTG
CGCAAGCCCG GCGCGCCATT GGGCACACGG CGCGAGGTCA AGAACCTCAA CAGCTTCAAG
TTCATGCAGC AAGCCATCGA CTATGAAGTG CGCTGGCAGA TTGAGCAACT TGAAGACGGC
CACGCGATTG AACAGGCCAC GGTATTGTTC GACCCCGACA GCGGTGAAAC GCGTTCCATG
CGCAGCAAGG AAGATGCGGC CGATTACCGT TATTTTCCCG ACCCGGATTT GCCGCCGCTG
GTGATTGCCG ATGACTGGGT GCAGCGGGTT CGCGCCGAGA TGACCGAGCT GCCGCGCGTC
ATGGCGCAGC GCTTTGTCGC TGACTATGGG CTCTCTGACT ACGATGCCAC GGCGCTGACT
CAAAGCCATG CCATTGCCGC CTATTTTCAA GCCGCCGCCA AAGCCTGCGG GCAGGCCAAA
CTGGCCAGCA ACTGGATCAT GGGCGACGTG GCGCGCCGAC TCAATACCGA TGAAATTGAC
ATCGCCCAGT CACCCGTGAA CGCCGCGCAG CTGGGTCTGT TAATCACCCG CATTGTGGAT
GGCACCCTGT CCAACAACGC AGCCAAACAG GTGCTCGATG CGCTGTGGGC CGGCGAGTCC
CCCGATGTCG ATGCGGTGAT TGAGTCCAAG GGTCTCAAGC AAATGAACGA CAGCGGCGCG
CTGGAAAAAA TTGTCGACGA CGTGCTGGCG GCCAACCCGA AAAACATCGA GCAGTACAAG
GCCGGCAACA GCAAGGCGCT CAACGCGCTG GTCGGTCAGA TCATGAAGGG CAGCCAAGGC
AAGGCCAACC CGCAGCAAGT CAACGATCTG CTGCGCAAGA AACTGGACTG A
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| Protein sequence | MNTFVEKAPS ASRAALPSPL VLGYEVVIGF ETHAQLSTQS KIFSRAATAF GAEPNTQACA
VDLALPGTLP VMNRGAVERA IQFALAIGAQ VSPRSIFARK NYFYPDLPKG YQISQFEIPV
VVGGEVEFYL DGEKRSVRLV RAHLEEDAGK SLHEDYVGQT GIDLNRAGTP LLEIVTEPDM
RSSLEAVAYA KELHKIVTWI GICDGNMQEG SFRCDANVSV RKPGAPLGTR REVKNLNSFK
FMQQAIDYEV RWQIEQLEDG HAIEQATVLF DPDSGETRSM RSKEDAADYR YFPDPDLPPL
VIADDWVQRV RAEMTELPRV MAQRFVADYG LSDYDATALT QSHAIAAYFQ AAAKACGQAK
LASNWIMGDV ARRLNTDEID IAQSPVNAAQ LGLLITRIVD GTLSNNAAKQ VLDALWAGES
PDVDAVIESK GLKQMNDSGA LEKIVDDVLA ANPKNIEQYK AGNSKALNAL VGQIMKGSQG
KANPQQVNDL LRKKLD
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