| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3895 |
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| Symbol | |
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| ID | 3961516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4348051 |
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| End bp | 4350192 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637918720 |
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| Product | Alpha-glucan phosphorylase |
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| Protein accession | YP_525125 |
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| Protein GI | 89902654 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02094] alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGCAG GTGACCAAGA CATTGAGCAT GCGGTCATGG AGCTGGCAAG CTTCCTGCCC
GAACCGCTGC GCCCGCTCGC CCGCGTGGCC TACAACTACC GCTGGTCCTG GACGACCGAC
GGTGCGGCCA TGTTCGAGGC GATTGACCCC GAGCGCTGGG TCCGTTGTGG GCGCAACCCG
CGGCGCTTGC TGTCCGAGAC GCCACCGTCC ATGTTGGCGC GCGCTTGCGC CGATGCGGGC
TTTGTCGGCT GGGTCAGCCG GATTGCGGCG GAGCTGGCTC TGGACGCCGC CCGGCCTTGC
TGTGAGGGCG CCATCAGAGC GGCGCACCCG GTCGCGTTTT GCTGTTCCGA GTTTGCCGTG
CATGGCTCCC TGCCCATCTA TTCGGGCGGA CTCGGCGTGC TGGCGGGCGA CATCTTGAAG
GAAGCCTCCG ACCTCGCCTT GCCCATGGTC GGCATCGGCC TGATGTACCG CACCGGCTAT
TTTCACCAGC GCATCGATGT GACCGGTTAC CAACATGAGT ACTGGCTCGA TGCCGACCCC
GAGCGACTGC CCTGCGTCAA AGTCACGGCT GCCGATGGCC GGCCGGTCAC GGTGGTCGTG
CCGATTGATG AGGAAAGTGT GACGGCGCAG GTCTGGCGCG TTGACGTCGG GCGGGTGCCG
CTCTACCTGC TCGATACCGA TCTGCCGGTC AACAGCCAGC GCGGGCGCTG GATCACGTCA
AGGCTGTATG AAGGCAACCG CGCGATTCGG CTGGCGCAGT ACGCGGTGCT CGGCGTCGGT
GGGGTGCGGG CCGTGCGCGC GCTGGGCATT GAGCCCGCCG TCTACCACCT CAACGAAGGC
CACCCCGCGC TCGGCGTCTT TGAATTGCTG GCCCGGGCGC AAGCGCTGAC TCCCGGGGCT
AGCGCACGTG AGGCCGCCTG GCAGCAGGTG CGCGAACAGG TCGTCTTTAC CACCCACACC
CCGGTCCCGG CGGGCAACGA GACCTACCAG CGCACCGAAG TCTTGACCAT GCTGGGGCGC
ATTGCCGATC TGGTGGGTGA GCGCGAACAC TTCCTGGCGC TGGGTCGCAT CGACCCGGCC
AACCCGAACC AGCCCATGGG CATGAACGCG CTGGCGTTGC GGGCCAGTCG TCACGCCAAT
GCGGTGAGCC AGCGGCACGG CCAGGTGGCG CGCGCCATGT GGCAGCCGCT GTTTCCGGGC
CGTGCCGTGC AGGAGGTGCC CATCACCCAC ATCACCAACG GCGTGCATGT GCCCAGCTGG
CTGCGCGGCC CCATGCGCGC CTTGCTGGAC CGCTACCTGG GCGAAGACTG GCTGCGCCGC
GCCGACCAGA GCGCCACCTG GGCGCCGGTG CAGGACATCC CCGGCGCCGA GCTGTGGGCG
GCGCGCTGCG CGGCGCGTGC CCAGCTGGTT GACATGATCG CGCGGCGGGC CACCAGCGAC
CGGCTGCGCC GCGGCGAGCC GCTCGATTAC GCCGAGGCCA TCGGCAGCGG CTTCGACCCG
ATGCGCCTGA CCATCGGCTT TGCCCGGCGG CTCGCCACCT ACAAGCGCCT GCACCTGGTG
GCGCTGTTGC CGCAGCGCGC GCTGGCGCTG ATCGGCGGCA CGCAGCCGGT GCAATTTGTG
TTTGCAGGCA AAGCCCATCC CGACGATCTC GCCGCCAAGG ACGTGGTGCG CCAGGTGTTT
GCCCTCAAGA ACGCACCCAG CGTGGCCGGT CGCGCCGCCT TTCTGGAGGA CTACGACCTG
ACGCTGGCGG CCCAGTTGGT GGCGGGCTGC GATGTGTGGG TCAATCTGCC CCGGCCGCCG
AACGAAGCCA GCGGCACCAG CGGCATGAAA TCCTGCCTGG GCGGCGGCCT GCAACTCTCG
GTGCTGGACG GCTGGTGGGC CGAGGCCTTT GACGGCAGCA ACGGCTGGGC CATCAATGGC
GACGTGATTG ATGACACCCA GGCGCAGGAT CAACGCGACG CCCATGCCCT GTTTGACCTG
CTGGAGCAGG AGGTGGTGCC GATGTTCCAT GAACGCGATG CCCAAGGCGT GCCGCAGCGC
TGGGTGAGCA TGATGCGGCG CAGCCTGCTC ACCAACGGCC CGCGCTTCTC GGCCACCCGC
ATGCTGCGTG ACTACGCGGA TCAGGTTTAC CGGCGCAACT GA
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| Protein sequence | MFAGDQDIEH AVMELASFLP EPLRPLARVA YNYRWSWTTD GAAMFEAIDP ERWVRCGRNP
RRLLSETPPS MLARACADAG FVGWVSRIAA ELALDAARPC CEGAIRAAHP VAFCCSEFAV
HGSLPIYSGG LGVLAGDILK EASDLALPMV GIGLMYRTGY FHQRIDVTGY QHEYWLDADP
ERLPCVKVTA ADGRPVTVVV PIDEESVTAQ VWRVDVGRVP LYLLDTDLPV NSQRGRWITS
RLYEGNRAIR LAQYAVLGVG GVRAVRALGI EPAVYHLNEG HPALGVFELL ARAQALTPGA
SAREAAWQQV REQVVFTTHT PVPAGNETYQ RTEVLTMLGR IADLVGEREH FLALGRIDPA
NPNQPMGMNA LALRASRHAN AVSQRHGQVA RAMWQPLFPG RAVQEVPITH ITNGVHVPSW
LRGPMRALLD RYLGEDWLRR ADQSATWAPV QDIPGAELWA ARCAARAQLV DMIARRATSD
RLRRGEPLDY AEAIGSGFDP MRLTIGFARR LATYKRLHLV ALLPQRALAL IGGTQPVQFV
FAGKAHPDDL AAKDVVRQVF ALKNAPSVAG RAAFLEDYDL TLAAQLVAGC DVWVNLPRPP
NEASGTSGMK SCLGGGLQLS VLDGWWAEAF DGSNGWAING DVIDDTQAQD QRDAHALFDL
LEQEVVPMFH ERDAQGVPQR WVSMMRRSLL TNGPRFSATR MLRDYADQVY RRN
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