Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3819 |
Symbol | |
ID | 3960074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 4262498 |
End bp | 4263010 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637918644 |
Product | outer membrane chaperone Skp (OmpH) |
Protein accession | YP_525049 |
Protein GI | 89902578 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2825] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAACT TTCTACGCCG GTGCTGCACC GGCCTTGCTT TCGCTGGCTT GCTGATCAGC GCTCAGGCGC AGGCACTTCA CCTTGGGTTT ATCAAAACCG ACCGCATCTT CAAGGAGGCC AATAGCGCCA AGATCGCCCA AACCAAACTG CAGCAGGAAT TTTCCAAGCG CGAAAAAGAG ATTGCTGCGC AGGATGCGCT GCTGAAGTCG GCGGCCAACA AATTTGAGGT CGAAGCGCCC ACCCTGTCGG AGGCGCAGCG TGTCAGCCGT CAAAAACAGT TGGCCGACCA GGACCGCGAG TTGCAACGAA AGCGTCGCGG TTTTGAGGAG GACCTGACTG CGCGCAAAAA TGACGAATTG CAGCAGCTGC TCGCAGACGC CAACAAGGTC GTCAAACAGG TGGCCGAGGC AGAAAAATAT GACCTGGTTT TGCAGGACGC AGTCTATGTC AGCCCAAAGC ATGACATCAC AGACAAGGTG CTGAAGATCA TGAATGCGCA GAGCGGCAAA TAA
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Protein sequence | MNNFLRRCCT GLAFAGLLIS AQAQALHLGF IKTDRIFKEA NSAKIAQTKL QQEFSKREKE IAAQDALLKS AANKFEVEAP TLSEAQRVSR QKQLADQDRE LQRKRRGFEE DLTARKNDEL QQLLADANKV VKQVAEAEKY DLVLQDAVYV SPKHDITDKV LKIMNAQSGK
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