Gene Rfer_3805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3805 
Symbol 
ID3960060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4245200 
End bp4246216 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content62% 
IMG OID637918631 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_525036 
Protein GI89902565 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000100968 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACCT ATGCTTCTTA CCCCTTGGGT CGCCCGCGCC GTTTGCGCCG TGACAGCTTC 
ACACGCAACC TGGTCCGTGA AAATGCACTG ACCCCGCATG ACCTGATCTA CCCGATTTTT
GTCGTGGACG GCCAACGGCA ACGCCAGGCG GTTTCCTCCA TGCCCGGCGT GGAGCGACTG
AGCCTGGACC TGCTCCTGCC GGTGGCCGAG GAATGCGTCC AGCTGGGCAT CCCGGTGATG
GCCTTGTTCC CGGTGATTGA GCAGTCGCTC AAAACCCCCG ATGGCCGCGA AGCCTTCAAC
CCGGACGGTC TGGTGCCGCG CGTGGTGCGG GCCTTGAAAA AGGAATTTCC CGAGCTGGGC
ATCATGACGG ACGTGGCGCT GGACCCCTTC ACCAGCCACG GCCAGGATGG CCTGCCCAGC
CCGGACCCGC TGGAAGACGG CTACATCATG AACGACGAAA CCGTCGAAGT ACTGGTCAAG
CAGGCCCTCT GTCAAGCGGC TGCCGGTACC GATATCGTCG CCCCCAGCGA CATGATGGAC
GGGCGCATCG GCGCCATTCG CCAGGCGCTG GAAGCGAATC ACTTCATTCA CACCCGCATC
ATGGCCTACA GCGCCAAATA CGCGTCTGCG TTTTACGGCC CGTTCCGCGA CGCCGTGGGC
TCGGCGGCCA ATCTGGGAAA AAGCAACAAG AAGGTCTACC AGATGGACCC GGGCAACTCC
AACGAAGCGC TGCGCGAAGT CGCGCTCGAT ATCGCCGAGG GCGCCGACAT GGTGATGGTC
AAGCCCGGCA TGCCGTATCT GGACGTGGTG CGCCGCGTCA AGGATGAGTT CAAGGTCCCC
ACTTTTGCCT ACCAGGTGTC GGGCGAATAC GCCATGCTCA AGGCCGCAGC GCAAAACGGC
TGGCTCGATC ATGACGCCGT CATGATGGAA AGCCTGCTGG CCTTCAAGCG CGCCGGGGCC
GATGGCGTAC TCACCTATTT CGCCCGTGAT GCGGCTCGAT TGCTACAAAA ACAATAG
 
Protein sequence
MTTYASYPLG RPRRLRRDSF TRNLVRENAL TPHDLIYPIF VVDGQRQRQA VSSMPGVERL 
SLDLLLPVAE ECVQLGIPVM ALFPVIEQSL KTPDGREAFN PDGLVPRVVR ALKKEFPELG
IMTDVALDPF TSHGQDGLPS PDPLEDGYIM NDETVEVLVK QALCQAAAGT DIVAPSDMMD
GRIGAIRQAL EANHFIHTRI MAYSAKYASA FYGPFRDAVG SAANLGKSNK KVYQMDPGNS
NEALREVALD IAEGADMVMV KPGMPYLDVV RRVKDEFKVP TFAYQVSGEY AMLKAAAQNG
WLDHDAVMME SLLAFKRAGA DGVLTYFARD AARLLQKQ