Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3803 |
Symbol | |
ID | 3962930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 4243378 |
End bp | 4244472 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637918629 |
Product | VanZ like protein |
Protein accession | YP_525034 |
Protein GI | 89902563 |
COG category | [S] Function unknown |
COG ID | [COG5652] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000277971 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACAAGA CCTCAGCCTG GCCCCTGGCT TTGATCTACG TCGGGCTGAT CTGTTACGCC AGTCTGTACC CCTTTTCCGA TTGGCGTTAC CAGGGCGTCG TGCCTTGGGC TTACCTCAGC AGCCCGTGGC CCAAATACTG GACCGGTTTT GATGTCACGA TCAATCTGTT GGGTTATTTG CCACTCGGTT TTTTGCTGGC GCTTAGCGCG TTGCGCACCA GCCGGGGGCG CTACGCCGTC GTGCTGGCGA CGCTGGCCGC TGGGGTCTTG TCGTTGACGA TGGAGTCGCT GCAGAGCTAT TTGCCTATGC GTGTGGCGTC GAATGTGGAC TTGGGTCTCA ATGTGGCGGG CGCCTGGCTG GGCGCGTTGC TGGCCTGGGG CATGGAAGAA TTGGGGGTCA TTGAACGCTG GAGCATTTTC AGAGCGCGCT GGTTTGTGAC AGATGCCCGA GGAGGCCTTG TGTTGTTGGC TTTGTGGCCG GTCGGCCTGT TGTTCCCGGC GGCGGTGCCA TTTGGCTTGG GGCAGGTGCT GGAACGGCTC GAAGCAAGCT TGGGGGATAT TCTGCAGGAC ACACCGTTGC TGGACTGGCT GCCGGTGCGC GATATCGAAC TGCAACCCCT GGTGCCAGGT GCTGAGCTGG TCTGCGTCAT GCTGGGCATG CTGATTCCGT GTCTGCTTGG TTTTTGCATC ATCCGCGCGA CCTCTCGGCG CCTGCTGTTC CTGTTGCTGG TGTTTGCCTG CGGCATGGGT GTTACGGCGC TCTCGGCCGC CTTGAGTTAT GGCCCGGAGC ATGCTTGGGC ATGGTTCAGC GAGCCGGTCA AGGCCGGCTT GGTCGCAGCG ATGGTGTTGG CGCTGTTGCT GCTGGGGGTG CCGCGACGTG TGAGCGCGGC CCTGGTGTTG CTGGCGCTGG GCGTCCACCT TGACTTGCTC AATCAGGCGC CTGCCAGTCC TTATTTTGCG CAAACCTTGT CCACCTGGGA GCAGGGACGT TTTATCCGTT TTCACGGCCT GGCGCAGTGG GTCGGGTGGT TGTGGCCTTA TGCAACTCTG GTTTATGTGC TGTTCAGGGT TTGGGTCAGA GACGCAAAAA ACTAG
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Protein sequence | MHKTSAWPLA LIYVGLICYA SLYPFSDWRY QGVVPWAYLS SPWPKYWTGF DVTINLLGYL PLGFLLALSA LRTSRGRYAV VLATLAAGVL SLTMESLQSY LPMRVASNVD LGLNVAGAWL GALLAWGMEE LGVIERWSIF RARWFVTDAR GGLVLLALWP VGLLFPAAVP FGLGQVLERL EASLGDILQD TPLLDWLPVR DIELQPLVPG AELVCVMLGM LIPCLLGFCI IRATSRRLLF LLLVFACGMG VTALSAALSY GPEHAWAWFS EPVKAGLVAA MVLALLLLGV PRRVSAALVL LALGVHLDLL NQAPASPYFA QTLSTWEQGR FIRFHGLAQW VGWLWPYATL VYVLFRVWVR DAKN
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