Gene Rfer_3778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3778 
Symbol 
ID3962411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4222316 
End bp4222690 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content57% 
IMG OID637918604 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_525009 
Protein GI89902538 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAAA AAATATTGGT AGCCGATGAT GAACCCAACA TCGTGATTTC ACTGGAGTAC 
CTGCTGAAAC GCGAGGGCTA CACGGTGCTG ATCGCACGCG ATGGCCAGGA AGCGCTGGAG
GCCATTGCAC GCGAAAAGCC CGACCTGGTG CTGCTGGACG TGATGATGCC TAAAAAGACC
GGTTTTGAGG TTTGCCAGGC GCTGCGCGCC AGCGACGACC TGCAAGCGAT AAAGATACTG
ATGCTCACCG CCAAGGGGCG CGATACCGAT GTTGCCAAGG GGCTGGCGCT GGGTGCTGAC
GCCTATATCA CCAAGCCTTT TTCAACCCGG GAACTGGTGC TGAAGGTCGC CGAGCTGCTG
CGTGAGTCGC CATGA
 
Protein sequence
MSQKILVADD EPNIVISLEY LLKREGYTVL IARDGQEALE AIAREKPDLV LLDVMMPKKT 
GFEVCQALRA SDDLQAIKIL MLTAKGRDTD VAKGLALGAD AYITKPFSTR ELVLKVAELL
RESP