Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3727 |
Symbol | |
ID | 3961076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 4158484 |
End bp | 4159215 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637918553 |
Product | aspartate racemase |
Protein accession | YP_524958 |
Protein GI | 89902487 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1794] Aspartate racemase |
TIGRFAM ID | [TIGR00035] aspartate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCCA TGGGTCTGAA AACACTTGGC CTGATCGGCG GCATGAGCTG GGAATCCACC GTGCCGTATT ACCGCGAGAT CAACGAAACC GTCAAAGCCC GGTTGGGCGG GCTGCACTCG GCCAAGATCA TTTTGTACAG CGTTGATTTT CATGAGATTG AACAGCTGCA AGCCAGCGGG CAATGGGACG CAGCCGCTGC CGTGCTGGCT GGCATTGCCC AGAAGCTGGA GCGTGCCGGG GCCGACGCGC TGGTGCTGTG CACCAACACC ATGCACAAGG TCGCGGCTGC CATTTCAAAC GCCGTGCAGA TCCCCTTGCT GCACATTGCC GACCCTACTG CAGTGGCCAT CAAACAGGCC GGTTACACGA CGGTCGGTTT GCTGGGCACG CGCTTCACCA TGGAGCAGGA CTTCTACCGC AGCCGTCTCG AACAGGATCA CAGCCTGACC GTGCTGACCC CCAAGCCAGC CGACCGGGAC CTGGTCCACC GGGTGATCTA TGACGAGTTG TGCCTGGGCC AAGTGTTGCC GGCCTCGCGC GACGCGTACC TGCGGGTGAT CGCCGACCTG GGCGCACGCG GCGCGCAGGC CATCATTTTG GGCTGCACCG AAATCGCCAT GCTGATTGGC CCACACGACT GCGATCTGCC GCTGTTTAAC ACCACGCAAT TACACGCCCA AAGCGCAGCC CAATGGGCAC TGGCCATCCA GCCACTGGAA AACAAAGCAT GA
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Protein sequence | MNSMGLKTLG LIGGMSWEST VPYYREINET VKARLGGLHS AKIILYSVDF HEIEQLQASG QWDAAAAVLA GIAQKLERAG ADALVLCTNT MHKVAAAISN AVQIPLLHIA DPTAVAIKQA GYTTVGLLGT RFTMEQDFYR SRLEQDHSLT VLTPKPADRD LVHRVIYDEL CLGQVLPASR DAYLRVIADL GARGAQAIIL GCTEIAMLIG PHDCDLPLFN TTQLHAQSAA QWALAIQPLE NKA
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