Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3681 |
Symbol | |
ID | 3964049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 4101164 |
End bp | 4102117 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637918497 |
Product | LysR family transcriptional regulator |
Protein accession | YP_524912 |
Protein GI | 89902441 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.555356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCTGA CCGAACTCAA ATACATTGTG GCCGTGGCGC GTGAGCGCCA CTTTGGCAAG GCGGCGGAGG CCTGCTATGT GTCGCAGCCC ACGCTCTCGG TGGCTGTCAA AAAGCTCGAA GAAGAGCTCG ATGTCAAGCT CTTTGAGCGC AGCGCCAATG AAGTCACGGT CACGCATCTG GGTGAAGAGA TTGTGCGCCA GGCGCAAAGC GTGCTGGAGC AGGCTAGCGC CATCAAGGAG ATGGCCAAGC GTGGCAAAGA CCCGTTGGCC GGACCGCTGA CGCTGGGCAT CATCTACACC ATTGGCCCGT ATCTGTTGCC TGACCTGGTG CGCCAGATGA TCAGTCACAC GCCGCAAATG CCGCTGATGC TGCAAGAAAA CTTCACCGTC AAACTGCTGG AGATGCTGCG CACGGGTGAA ATTGACTGCG CCATTCTGGC CGAGCCATTC CCGGATGCCG GGCTGGCGAT TGCGCCGCTG TATGACGAGC CCTTTCTGGC GGTGGTGCCG GCCAATCATC CCTTGGCCGC GCAGACTCAG GTGACGACCG AACAACTCAA ACAAGAGACG ATGCTGTTGC TGGGCAGCGG CCACTGTTTT CGCGACCACG TGCTGGAGGT CTGCCCGGAG TTCGCGCGTT TTTCTACCAA TGCCGAGGGT ATCCGCCGCA GTTTTGAAGG CTCCTCCCTG GAGACCATCA AGCACATGGT CGCGGCCGGC ATGGGCGTCA CGCTGGTGCC GCGTCTGAGC GTGCCCAAAG AGGCGCTGGC GCTCAAACCC CGGCGCAAAC GCGATGAAGA TCCGTATGTG AAATACCTGC CGTTTGAGGG CGACCCGCCC AAGCGCCGCG TGGTGCTGGC GTGGCGGCGC AGCTTCACGC GTTATGAGGC GATTGCCGCC CTGCGCAATG CCATCTACGC CTGCGAATTG CCGGGCGTAC AGCGTTTATC CTGA
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Protein sequence | MTLTELKYIV AVARERHFGK AAEACYVSQP TLSVAVKKLE EELDVKLFER SANEVTVTHL GEEIVRQAQS VLEQASAIKE MAKRGKDPLA GPLTLGIIYT IGPYLLPDLV RQMISHTPQM PLMLQENFTV KLLEMLRTGE IDCAILAEPF PDAGLAIAPL YDEPFLAVVP ANHPLAAQTQ VTTEQLKQET MLLLGSGHCF RDHVLEVCPE FARFSTNAEG IRRSFEGSSL ETIKHMVAAG MGVTLVPRLS VPKEALALKP RRKRDEDPYV KYLPFEGDPP KRRVVLAWRR SFTRYEAIAA LRNAIYACEL PGVQRLS
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