Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3679 |
Symbol | |
ID | 3964047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 4099344 |
End bp | 4100159 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637918495 |
Product | pyrroline-5-carboxylate reductase |
Protein accession | YP_524910 |
Protein GI | 89902439 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAAC GCATCGCATT CATTGGCGGC GGCAACATGG CCAGCGCCAT CATCGGCGGC TTGATCAAGC AAGGTTTGGC GCCCCGTCAG ATTGACGTGG TGGAGCCCCA GGCTGAAGCG CGCGACAAGC TCGCCTGCAG TTATGGCCTG CAGCCCCACG CCGAGGCGGG GGCATTTTTG GCCCAGGCCG ACTTGGTGAT CTGGGCCGTC AAGCCACAGA CCTTCAAGGA CGCCGCACTG GCCGTGGCGC CACACACCGC CAACGCTTTG CACCTGAGCG TCGCCGCCGG CATTCCCAGC GACAGCATCG CGCGCTGGCT CGGTACCGAG CGCGTGGTTC GCGCCATGCC CAACACACCG GCGCTGATCG GCAAAGGGAT CAGCGGCCTG TTTGCCCGCT CGGCAGTGTC CAGCGCGGAC AAGGACTGGA TCAGCCAGAT CATGGCCAGC ACGGGGGAGT TTCTCTGGTT TGACGCCGAA GGACAACTCG ACGCGGTCAC CGCCCTGTCG GGCTCCGGCC CCGCCTACGT TTTTTACTTC ATGGAAGCGA TGACCACCGC CGGTTGTGAA ATGGGATTGA GCCGCGAGCA GGCGCACCAG TTGACGGTGG CCACCTTTGT CGGAGCCAGC GAACTGGCAC GCACTTCGAG CGAGCCGCCC AAAGTCTTGC GCCAGCGCGT CACCTCCAAG GGCGGCACCA CCTTCGCGGC CATTTCTTCG ATGGAAGACG GCGACCTGCA GGCCGAATTC ATCAACGCCA TTTACGCCGC CCGGCAACGA GCCCAGGAGT TGGGCGACGA ATTGGGCGGC GCCTGA
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Protein sequence | MTQRIAFIGG GNMASAIIGG LIKQGLAPRQ IDVVEPQAEA RDKLACSYGL QPHAEAGAFL AQADLVIWAV KPQTFKDAAL AVAPHTANAL HLSVAAGIPS DSIARWLGTE RVVRAMPNTP ALIGKGISGL FARSAVSSAD KDWISQIMAS TGEFLWFDAE GQLDAVTALS GSGPAYVFYF MEAMTTAGCE MGLSREQAHQ LTVATFVGAS ELARTSSEPP KVLRQRVTSK GGTTFAAISS MEDGDLQAEF INAIYAARQR AQELGDELGG A
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