Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3602 |
Symbol | trpD |
ID | 3962617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 4012872 |
End bp | 4013924 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637918422 |
Product | anthranilate phosphoribosyltransferase |
Protein accession | YP_524837 |
Protein GI | 89902366 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.219845 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAACA CCCACAAAAT CACCCCGCAA GAAGCGCTCT TGCGCACCAT TGAGCACCGC GAGATTTTTC ACGACGAGAT GCTGCACATC ATGCGCGGCA TCATGACGGG CGAGTGGTCG CCGGTCATGA TGGCGGCCCT GATCACCGGC CTGCGCGTCA AAAAGGAAAC CATCGGCGAA ATCACGGCCG CCGCGCAGGT GATGCGCGAG TTCTCCACCA AGGTCAACGT CGCCGACACA AGCCATCTGG TGGACATTGT GGGCACCGGC GGTGACGGCT CGCACACTTT CAACATTTCA ACTTGCGCCA TGTTTGTGGC CGCCGCTGCC GGCGCCCGGG TCAGCAAGCA CGGTGGCCGC AGCGTCAGCA GCAAGAGCGG CAGCGCCGAC GTGATGGAGT CGCTGGGCGT CAACATCAAC CTGTCGCCCG AGGCCATTGC CCAGTGTATT GAACAGGTGG GGGTCGGCTT TATGTTTGCG CCCAATCACC ACCCGGCCAT GAAGAACGTG GCGCCGGTGC GCAAGGAGCT GGGCATCAAG ACCATCTTCA ATCTGCTCGG GCCGCTGACC AACCCGGCGG GAGCCCCCAA TATCCTGATG GGTGTGTTTC ACCCGGACCT GGTGGGTATT CAGGTGCGCG CGCTGCAGCG GCTGGGCGCC GAGCACGCGG TCGTGGTGTA TGGCAAAGAC GGTATGGATG AGGTGTCACT GGGCGCGACC ACGTTGGTCG GAGAGCTCAA ACACGGTGAA ATCACCGAGT ATGAGATTCA CCCGGAAGAC TTCGGCATGG TCATGGCCAG CAACCGCGCG CTCAAGGTGG AAACGCCGGA GCAGTCCAAA ACCATGCTGC AGGGGGTGCT GGACAACGCG GCGGGGGCGC CCAAAGACAT CGTGATTCTC AATGCCGGTG TGGCGCTGTA CGCTGCCAAC GTCGTGCCGA CGATGAGCGC TGGCATTGAC AAAGCACGAG TGGCCATTGA ATCAGGCGCG GCCAGAGCCA AGCTGGCGCA ACTGGTTTCC ATGTCCCAAC AACTGAAAGG CGCAGCGAAG TGA
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Protein sequence | MPNTHKITPQ EALLRTIEHR EIFHDEMLHI MRGIMTGEWS PVMMAALITG LRVKKETIGE ITAAAQVMRE FSTKVNVADT SHLVDIVGTG GDGSHTFNIS TCAMFVAAAA GARVSKHGGR SVSSKSGSAD VMESLGVNIN LSPEAIAQCI EQVGVGFMFA PNHHPAMKNV APVRKELGIK TIFNLLGPLT NPAGAPNILM GVFHPDLVGI QVRALQRLGA EHAVVVYGKD GMDEVSLGAT TLVGELKHGE ITEYEIHPED FGMVMASNRA LKVETPEQSK TMLQGVLDNA AGAPKDIVIL NAGVALYAAN VVPTMSAGID KARVAIESGA ARAKLAQLVS MSQQLKGAAK
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