| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3547 |
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| Symbol | |
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| ID | 3961139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3944298 |
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| End bp | 3945242 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637918363 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_524783 |
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| Protein GI | 89902312 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.928319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGACG CCGCCGATAT TCTTGCTGCC AGCATCCTGA TCGTGGACGA TCAGGAGGTC
AATGTGCGGC TGCTGGAGCA AATACTGCGT GAAGCCGGCT ATCGGCGCCT GACGTCAACC
ATGGATCCAT ATGCCGTGTG CGACCTGCAT CGCACCAACC GTTACGACCT GATATTGCTC
GATCTCGAGA TGCCCGGCCG GGATGGTTTT CAGGTGATGG AGGCGCTGAA GGAAGATGAA
GCCGATGCCG ACGGCTACTT TCCGATACTG GTGATCACGG CCCATCCGGA CCATAAGCTG
AGGGCATTGG CCTCCGGGGC GAAAGACTTC ATCAGCAAAC CATTTGACCT GATGGAAGTC
AGGACGCGCA TTCACAATAT GCTGGAAGTG CGCCTGTTGT ACAAACAACT CGAACACCAG
AACCGAGCGC TGGAATCCCT GGCACTGCAT GACCCCTTGA CCGGGCTGCC CAATAGACGA
CTCCTGATGG ACAGAATGGC CTTGGGCATT GCCCATGCGC GCAGGAACAG GGGCAATATG
GCGGTCGTGT ATCTGGATCT CGACGGGTTC AAGGAGATCA ACGACACCCT GGGCCACGAT
GGGGGCGACG CCCTGCTCAA AATGGTGGCT ACCCGTCTGG TGGGCGCCGT GCGTCAAGAG
GACACGGTGG CGCGGGTGGG TGGCGATGAA TTTGTGATTG CGTTGGCGGA ACTGAGTCAT
GGTGACGATA TGGAAAAGCT GGTGTCCAAG GTGCTGCAAG CCGTGTCAAA GCCCTGCAGC
ATTCAAGGCA GCAGCGTGAA TGTGACGGCC AGCGTCGGTG TCAGTGTTTA CCCGGTGCAT
GGTGATAACG TCGAGACGCT GATGAAGAGC GCGGATCTGG CCTTGTATGA GGCCAAAGGC
GCAGGAAAGA ACGACTATCG CATCTCAGGG CTCGCCGAGC TGTGA
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| Protein sequence | MLDAADILAA SILIVDDQEV NVRLLEQILR EAGYRRLTST MDPYAVCDLH RTNRYDLILL
DLEMPGRDGF QVMEALKEDE ADADGYFPIL VITAHPDHKL RALASGAKDF ISKPFDLMEV
RTRIHNMLEV RLLYKQLEHQ NRALESLALH DPLTGLPNRR LLMDRMALGI AHARRNRGNM
AVVYLDLDGF KEINDTLGHD GGDALLKMVA TRLVGAVRQE DTVARVGGDE FVIALAELSH
GDDMEKLVSK VLQAVSKPCS IQGSSVNVTA SVGVSVYPVH GDNVETLMKS ADLALYEAKG
AGKNDYRISG LAEL
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