| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3521 |
|---|
| Symbol | slmA |
|---|
| ID | 3963371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 3917153 |
|---|
| End bp | 3917875 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637918337 |
|---|
| Product | nucleoid occlusion protein |
|---|
| Protein accession | YP_524757 |
|---|
| Protein GI | 162289251 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAACG CCGAATTGAC CCCCTCCCTG CTCTCTTTCC CAAGCACCGA CAACCGAGAA
CCGGCCGCTC TGGCGCGCAA GCGGCTGAAA CCGGGGGAGC GCCGGGAGCA GATACTGCAA
GCCCTGGCGC AGATGCTGGA ACAGCCCGGC TCGGAGCGCA TCACCACTGC GGCCCTGGCG
GCGCGTCTTG AGGTCAGCGA GGCCGCGTTG TACCGGCACT TTGCCAGCAA GGCGCAGATG
TTTGAGGGCC TGATCGAGTT CATTGAACAG ACGGTGTTTT CGCTGGTCAA CCAGATTGCC
GAACGCCAGA GCTCACCCAT GACGGAGGGT GTCGTGGCCG CTGGGGCGGG ACCATTGCTG
GACGCCGTGA CCAGCGCCCA GTTAGGCGTG CGTCAGGCCG CGCAGGTGGT GACCATGCTG
CTGCAGTTCG CCGAGAAAAA TCCCGGCATG ACCCGCGTCA TGGTGGGTGA TGCGCTGGTG
TTCGAGAACG AGCGCCTGCA ACAGCGCATG AACCAGTTTT TCGACAAGAT CGAGTCCAGC
CTCAAGCAAA GCCTGCGCGC GGGCGCCGAG TTGCGTGGCT CGGCCACACC CAGTCTTGAC
ACCCAGGTGC GGGCGTCGGT CCTGATTGCT TTTGTCGTTG GGCGCCTGCA GCGCTTTGCG
CGCTCCAACT TCAAGCGCCT GCCTTGCGAA CACCTCGAGG CCGCCCTGGC ACTGATGCTC
TGA
|
|---|
| Protein sequence | MSNAELTPSL LSFPSTDNRE PAALARKRLK PGERREQILQ ALAQMLEQPG SERITTAALA
ARLEVSEAAL YRHFASKAQM FEGLIEFIEQ TVFSLVNQIA ERQSSPMTEG VVAAGAGPLL
DAVTSAQLGV RQAAQVVTML LQFAEKNPGM TRVMVGDALV FENERLQQRM NQFFDKIESS
LKQSLRAGAE LRGSATPSLD TQVRASVLIA FVVGRLQRFA RSNFKRLPCE HLEAALALML
|
|---|
| |