| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3519 |
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| Symbol | |
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| ID | 3963369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3914467 |
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| End bp | 3916263 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637918335 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_524755 |
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| Protein GI | 89902284 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGACCT ATACCCCCCC TCTGCGTGAC ATGCAGTTTG TGATGCACGA AGTGCTCCAC
GTTGTTGACG ATTTGACAGC CATCCCCAAG CACGCCGATA TGGATGTTGA CACCATCAAC
GCCGTGCTGG AAGAAGGTGG CAAATTTGCC GCCGAAGTGG CTTTTCCCTT GAACCAGAGC
GGCGATGCCG AGGGCTGCAA GCTCGACCCG GTGACGCATG AGGTCACCAC GCCCACCGGC
TTCAAGGAGG CTTACGCCAA ATACGTTGAA GGGGGTTGGC CCGCGCTGGC CTGCGACACC
GCCTTTGGGG GTCAGGGTCT GCCGCACATC GTCAATCAGT GTTTCTACGA GATGCTCAAC
AGCGCCAATC AATCCTGGAC CATGTACCCG GGGCTGACGC ACGGTGCTTA TGCGGCCCTG
CATGCGCACG GCACTGAAGA GCAAAAGCAG ACCTATCTGC ACAAGATGAC CAGTGGTGAG
TGGCTCGGCA CCATGTGCCT GACCGAGGCG CATTGCGGCA CTGACCTGGG TCTGATGCGC
AGCAAGGCCG AGCCGCAGGC CGACGGCACG TACAAAATTA CGGGCGAAAA AATATTCATC
AGTGCCGGCG AGAACGACAT GGCCAGCAAC ATCATTCACC TGGTGTTGGC CCGTCTGCCC
GATGCACCGG TTGGCATCAA GGGGGTGAGT CTTTTCATCG TGCCCAAGTT CCTGGTCAAG
CAGGACGGCT CGCTGGGCGC TCGCAATGGT ATTTACTGCG GCGGCCTGGA GCACAAGATG
GGCATCTGTG GCAACGCCAC GGCGCAACTG GTGCTCGACG GCGCGGTCGG CACCATGGTG
GGGCAGCCCA ACAAAGGCAT GCAAGCCATG TTTGTGATGA TGAACGCGGC GCGTCTGGGT
GTCGGCAACC AGTCGCTCGG CCAGACGGAA GTGGCTTATC AGAACGCGCT GGCCTACGCC
AAGGAGCGCA TCCAGATGCG CTCGCTCACC GGCGTCAAGG CCAAGGACAA GCCGGCCGAC
CCGATCATCG TGCATCCGGA CGTGCGCAAG ATGCTGCTCA CGGCCAAGGC CTACGCCGAA
GGCGGCCGCG CCCTGTTGTG TTACAGCGCC ATGTTGCTGG AAAAAGAGCA CAGCCATCCT
GACGAGAAAG TGCGCAAGGA CGCTGGTGAA TTGCTGGCCA TGCTGACCCC GATCGTCAAA
GCCTTCATCA CGGACAACGG CCATATTTCC ACCAATGCCT GTATGCAGGT GTTTGGTGGC
CACGGTTACA TCAAGGACTG GGGCATGGAG CAATTTGCGC GCGACAACCG CATCAACATG
ATTTATGAAG GCACCAACAC AGTCCAGTCG CTGGACTTGC TGGGACGCAA AATCCTGGGC
AACAACGGCG CCACCTTGCG CAAGTTTGGC AAGCTCGTTG GCCAACTGGT GGCCGAAGAA
GGCGTCAACG AAAAGATGGC CGAATTCATC ACCCCGATCG CCATTCTTGG CGACCAGATG
ACCAAGTTCA CGACCGAAAT CGGTTTCAAG GGCTTCCAGA ACGCCGATGA AGTGGGCGCT
GCCGCCGTGG ACTACCTGCG CGTGGCCGGT CACCTGGTGT TTGGCTACTT CTGGGCCCGC
ATGGCGCAAG TGGCCTTGCG TGAAATTGCC GCCGGCAACA CCGACTCCTT CTACCTGGCC
AAGGTGCAGA CGGCGCGCTT CTACTTTGCC AAACTGTTCC CCGAAACCGC CACGCTGATG
CGCACGGCAC GCGCCGGCAG CAAAGTGTTG ATGGACACCG ATGCGGCCCT GGCCTGA
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| Protein sequence | MPTYTPPLRD MQFVMHEVLH VVDDLTAIPK HADMDVDTIN AVLEEGGKFA AEVAFPLNQS
GDAEGCKLDP VTHEVTTPTG FKEAYAKYVE GGWPALACDT AFGGQGLPHI VNQCFYEMLN
SANQSWTMYP GLTHGAYAAL HAHGTEEQKQ TYLHKMTSGE WLGTMCLTEA HCGTDLGLMR
SKAEPQADGT YKITGEKIFI SAGENDMASN IIHLVLARLP DAPVGIKGVS LFIVPKFLVK
QDGSLGARNG IYCGGLEHKM GICGNATAQL VLDGAVGTMV GQPNKGMQAM FVMMNAARLG
VGNQSLGQTE VAYQNALAYA KERIQMRSLT GVKAKDKPAD PIIVHPDVRK MLLTAKAYAE
GGRALLCYSA MLLEKEHSHP DEKVRKDAGE LLAMLTPIVK AFITDNGHIS TNACMQVFGG
HGYIKDWGME QFARDNRINM IYEGTNTVQS LDLLGRKILG NNGATLRKFG KLVGQLVAEE
GVNEKMAEFI TPIAILGDQM TKFTTEIGFK GFQNADEVGA AAVDYLRVAG HLVFGYFWAR
MAQVALREIA AGNTDSFYLA KVQTARFYFA KLFPETATLM RTARAGSKVL MDTDAALA
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