Gene Rfer_3462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3462 
Symbol 
ID3962570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp3854170 
End bp3854799 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content62% 
IMG OID637918280 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_524700 
Protein GI89902229 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTCT CTACCTGGTT AACCTTTTTC GCCGCCTCGT GGGCCATCAG CATCTCGCCT 
GGGCCGGGCG CCATTGCCTC GATGAGCGCC GGCTTGAATC ATGGTTTCAA GCGCGGCTAT 
GTCATCATTT TTGGCTTGGT GCTGGGCATC TGGACGCAGT TGGCAGTTGT CGGTGTGGGT 
TTGGGCGCGC TGGTTGCGGC GTCCAGCACC GCGTTTACCG TCGTCAAGTG GCTGGGCGTG 
GCGTATCTGG TGTGGCTGGG CATTGCGCAG TGGCGCGCCC CTGCGCGGCC GATGGTGGCA 
GTGTCAGATT CCGGCGAGCT TGTCAGCCGG CGCTCCATGA TTCTGCGCGC CTGGATGATC 
AATGTGGTCA ACCCCAAGGG CACGGTGTTT CTGCTGGCGG TGGTGCCGCA GTTCATGAAT 
TTGTCGCAGC CGCTGCTGCC GCAGTACCTG ACTATCGGCG CCACGCTGGC GTTTACCGAC 
ATGGTGGTGA TGGCCGGTTA CACCGCCTTG GCGGCCAAGG TGCTGGGGGC CTTGAAGGAA 
CCGTCCCACA TTCGTGTCAT GAACCGCACC TTTGGCAGCC TGTTTGTGCT GGCGGGCTCG 
CTGCTGGCGC TGTTCAAGCG GGCAGTCTGA
 
Protein sequence
MELSTWLTFF AASWAISISP GPGAIASMSA GLNHGFKRGY VIIFGLVLGI WTQLAVVGVG 
LGALVAASST AFTVVKWLGV AYLVWLGIAQ WRAPARPMVA VSDSGELVSR RSMILRAWMI 
NVVNPKGTVF LLAVVPQFMN LSQPLLPQYL TIGATLAFTD MVVMAGYTAL AAKVLGALKE 
PSHIRVMNRT FGSLFVLAGS LLALFKRAV